Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-889P-201ENST00000517189 103 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC005000.1-201ENST00000536192 288 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC139697.1-201ENST00000548429 745 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 MIR4433B-201ENST00000581329 102 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.08□□□□□ -1.28
ERCC4Q92889 BNIP3P32-201ENST00000600015 554 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AL133247.2-201ENST00000603236 482 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AC098935.2-201ENST00000604222 466 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC004775.1-201ENST00000607389 753 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AL121652.1-201ENST00000608851 448 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 DUXAP10-204ENST00000612052 616 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ERCC4Q92889 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 AL359955.1-201ENST00000455242 3275 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC4Q92889 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 HDAC1P2-201ENST00000453661 1398 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ERCC4Q92889 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ERCC4Q92889 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ERCC4Q92889 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 AL445238.1-204ENST00000400311 463 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 MTND1P31-201ENST00000449206 961 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 VPS25P1-201ENST00000455691 508 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 snoU109.3-201ENST00000459477 145 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 RPS4XP17-201ENST00000479057 754 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 NPM1P17-201ENST00000479221 602 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC131935.1-201ENST00000524621 333 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 OR9G2P-201ENST00000533326 880 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.07□□□□□ -1.28
ERCC4Q92889 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC107993.1-201ENST00000591343 684 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 MIMT1-201ENST00000597105 1050 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC005899.6-201ENST00000620729 297 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AC138907.10-201ENST00000623708 983 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AP001153.1-201ENST00000641024 338 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 AL137058.3-201ENST00000624531 3099 ntBASIC7.07□□□□□ -1.28
ERCC4Q92889 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms