Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 GNL2P1-201ENST00000451274 2190 ntBASIC5.62□□□□□ -1.51
CLHC1Q8NHS4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC005005.4-201ENST00000623789 16698 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 RPS4XP5-201ENST00000419038 768 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 RPSAP65-201ENST00000429660 595 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AL445466.1-201ENST00000448432 357 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC044810.1-201ENST00000480271 711 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC126615.2-201ENST00000553003 515 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC060780.2-201ENST00000589047 198 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AL513327.3-201ENST00000602618 469 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 MIR6721-201ENST00000617181 87 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 FAM27E2-201ENST00000619668 403 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 AC099654.15-201ENST00000639802 509 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 CASC19-260ENST00000641828 2001 ntBASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLHC1Q8NHS4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 RNU6-249P-201ENST00000363016 102 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AL034417.1-201ENST00000399343 800 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 GCNT1P4-201ENST00000404096 329 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 RPS14P4-201ENST00000415880 418 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 TRIM60P16-201ENST00000444048 694 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 RN7SL254P-201ENST00000460609 284 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 RN7SL269P-201ENST00000467795 305 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AL157777.1-201ENST00000468100 304 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC006539.1-201ENST00000481419 501 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AL451049.1-201ENST00000608672 497 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 uc_338.31-201ENST00000615595 186 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 HTR1DP1-201ENST00000616500 888 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC004801.6-201ENST00000616571 978 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms