Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RN7SL72P-201ENST00000460697 269 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AP002884.5-201ENST00000595053 1132 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC096861.1-201ENST00000616652 240 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL049767.1-202ENST00000637826 242 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AP000866.6-201ENST00000638898 3579 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 C4BPAP1-201ENST00000415474 1893 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GNL2P1-201ENST00000451274 2190 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC015813.6-201ENST00000624409 5808 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 IMMTP1-201ENST00000435590 2219 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL445238.1-204ENST00000400311 463 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RN7SL230P-201ENST00000580835 303 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC024940.4-201ENST00000605507 246 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC087269.2-201ENST00000641764 975 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL161756.3-201ENST00000641216 2071 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 VDAC1P6-201ENST00000430062 855 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 OR3D1P-201ENST00000438288 955 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 SUMO2P10-201ENST00000452006 288 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC115223.1-201ENST00000466377 870 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL512310.9-201ENST00000553311 948 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 IGLCOR22-2-201ENST00000605398 313 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC097467.4-201ENST00000605504 141 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL590763.1-201ENST00000398297 1545 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MIR585-201ENST00000384887 94 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 SPTLC1P2-201ENST00000407089 121 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RN7SL799P-201ENST00000475891 298 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC141002.1-201ENST00000607025 279 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 COG2-209ENST00000534989 2963 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 OR11H13P-201ENST00000359695 979 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC245047.1-201ENST00000433276 873 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL163193.1-201ENST00000444895 788 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC090958.1-201ENST00000511122 351 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 SCARNA6.1-201ENST00000516989 238 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 PCNAP4-201ENST00000532690 730 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LDHC-203ENST00000535809 757 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LDHC-205ENST00000537486 583 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AF230666.2-201ENST00000602328 725 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 NAA60-237ENST00000615865 326 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms