Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC005077.1-201ENST00000449226 375 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 CFL1P4-201ENST00000451536 498 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC098847.1-201ENST00000473094 348 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AL117692.1-201ENST00000494283 713 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AL121594.2-201ENST00000541658 472 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 RPA2P1-201ENST00000556557 721 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 NPM1P42-201ENST00000560329 862 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AP005119.1-201ENST00000580956 292 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC090236.2-201ENST00000587933 1101 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC145423.1-201ENST00000605712 336 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AL136131.3-201ENST00000607600 188 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AP001437.1-201ENST00000608783 456 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC092266.1-201ENST00000610958 165 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC004801.6-201ENST00000616571 978 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC245014.3-201ENST00000618589 347 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC048341.3-201ENST00000619323 491 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC096708.4-201ENST00000620563 552 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC104966.1-201ENST00000467010 1464 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AL161756.3-201ENST00000641216 2071 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 SELENOWP1-201ENST00000322792 252 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RNA5SP232-201ENST00000364144 119 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RPS4XP5-201ENST00000419038 768 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 KIF4CP-201ENST00000422742 1279 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 BMS1P10-201ENST00000443754 1120 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC118758.1-202ENST00000454719 225 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RN7SL269P-201ENST00000467795 305 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AL158068.1-201ENST00000506116 616 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RN7SKP183-201ENST00000517169 324 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RN7SKP35-201ENST00000517210 151 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AP003396.4-201ENST00000527574 265 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC084121.1-201ENST00000533882 835 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC026826.3-201ENST00000561747 158 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AL591926.1-201ENST00000620542 217 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 MIR6806-201ENST00000622141 64 ntBASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TTC9CQ8N5M4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms