Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC073900.1-201ENST00000429766 776 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RPL5P10-201ENST00000445207 894 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ZNF619P1-201ENST00000446539 752 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MRPL35P2-201ENST00000448009 511 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RN7SL160P-201ENST00000468558 284 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC023424.2-201ENST00000493479 777 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC024589.1-201ENST00000512207 263 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 EGLN3P1-201ENST00000541727 720 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RN7SL689P-201ENST00000577215 297 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MIR3135A-201ENST00000578460 77 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC090578.1-201ENST00000604955 591 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC096553.1-201ENST00000605169 829 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL121873.1-201ENST00000616013 524 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RMST_10.1-201ENST00000616309 154 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL136221.1-201ENST00000621449 509 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AC019278.1-201ENST00000623516 479 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AP005264.7-201ENST00000625003 745 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 OR5H6-203ENST00000642105 978 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL133268.1-201ENST00000405676 1401 ntBASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ATG4DQ86TL0 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC138915.4-201ENST00000565549 4147 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 KYNUP3-201ENST00000574386 1341 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 KYNUP2-201ENST00000582280 1329 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RNU6-413P-201ENST00000384115 107 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RNU6-1200P-201ENST00000384162 107 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 MTCO3P31-201ENST00000405526 789 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RNU6-757P-201ENST00000410334 100 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 RPL7P8-201ENST00000411964 730 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC009237.5-201ENST00000414271 501 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 YWHAZP5-201ENST00000419975 730 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AP003385.1-201ENST00000426387 893 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4DQ86TL0 ARL5AP3-201ENST00000439327 386 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 USP9YP8-201ENST00000441913 500 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 MTND1P11-201ENST00000456661 876 ntBASIC6.54□□□□□ -1.36
ATG4DQ86TL0 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms