Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AL009028.1-201ENST00000604895 802 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AL365204.3-201ENST00000612448 685 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 CASC19-206ENST00000641028 1430 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC126773.4-201ENST00000612545 3043 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC245505.2-201ENST00000553572 3055 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL139327.1-201ENST00000382988 348 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC092952.1-201ENST00000397646 1209 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL355375.1-201ENST00000405686 392 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC007390.1-201ENST00000415722 356 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL121878.1-201ENST00000418638 859 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 DEFA9P-201ENST00000433042 285 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 HBBP1-201ENST00000433329 439 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL450263.2-201ENST00000439400 589 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 PMCHL2-203ENST00000457791 237 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 RN7SL91P-201ENST00000469313 291 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 RPS4XP15-201ENST00000489210 795 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AP004833.3-201ENST00000531893 322 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CR383656.6-201ENST00000550518 394 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CHCHD3P2-201ENST00000550751 639 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC090415.1-201ENST00000581877 847 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL050343.2-201ENST00000607338 280 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC099676.1-201ENST00000608886 657 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AL445264.1-201ENST00000621719 171 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 AC069542.2-201ENST00000624816 216 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 OR52B5P-202ENST00000641118 1110 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 GOT2P1-201ENST00000440922 1309 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CUL4AP1-201ENST00000514750 1863 ntBASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.68□□□□□ -1.18
LYSMD3Q7Z3D4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 AL645937.1-201ENST00000641739 1652 ntBASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LYSMD3Q7Z3D4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms