Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
RTL4Q6ZR62 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RTL4Q6ZR62 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RTL4Q6ZR62 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.59□□□□□ -1.52
RTL4Q6ZR62 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RTL4Q6ZR62 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AP005432.1-201ENST00000580891 3485 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC016745.2-201ENST00000608834 3443 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 SUGT1P2-201ENST00000379452 992 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AL354868.1-201ENST00000417077 482 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC009506.2-201ENST00000420635 840 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AL731534.1-201ENST00000434711 269 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC016027.4-201ENST00000450866 277 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC083795.1-201ENST00000491760 320 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC060775.1-201ENST00000518241 520 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC108865.2-201ENST00000606881 432 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC096861.1-201ENST00000616652 240 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AC096708.4-201ENST00000620563 552 ntBASIC5.58□□□□□ -1.52
RTL4Q6ZR62 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RTL4Q6ZR62 GNL2P1-201ENST00000451274 2190 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC023490.2-201ENST00000359859 470 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 SNORA11.3-201ENST00000408471 128 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 HMGN1P20-201ENST00000411849 300 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC092651.1-201ENST00000426110 312 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AL359839.1-201ENST00000451975 1160 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC144530.1-201ENST00000452862 555 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 CST12P-201ENST00000457644 362 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 SUMO2P4-201ENST00000504193 276 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC090568.1-201ENST00000509499 856 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 SCARNA18.1-201ENST00000516330 83 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC020937.1-201ENST00000519677 1013 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 TPM3P3-201ENST00000521343 354 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AP005119.1-201ENST00000580956 292 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 RNU4ATAC-201ENST00000580972 127 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.57□□□□□ -1.52
RTL4Q6ZR62 SNORA11.6-201ENST00000619030 128 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AP001962.1-201ENST00000624114 559 ntBASIC5.57□□□□□ -1.52
RTL4Q6ZR62 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms