Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC097359.1-201ENST00000447946 463 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX4Q33E94 MEMO1P4-201ENST00000453590 386 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX4Q33E94 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 OR4A17P-201ENST00000526032 904 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.41□□□□□ -1.54
RFX4Q33E94 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX4Q33E94 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX4Q33E94 MIR3157-201ENST00000578688 85 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 MIR4660-201ENST00000583549 74 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.41□□□□□ -1.54
RFX4Q33E94 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX4Q33E94 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC005899.6-201ENST00000620729 297 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.41□□□□□ -1.54
RFX4Q33E94 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RFX4Q33E94 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 AC097063.1-201ENST00000426714 1797 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX4Q33E94 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 FBXL21-201ENST00000297158 1305 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 LINC01613-201ENST00000561476 2780 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RFX4Q33E94 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX4Q33E94 RBMY1HP-201ENST00000382759 1389 ntBASIC5.41□□□□□ -1.54
RFX4Q33E94 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
RFX4Q33E94 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX4Q33E94 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX4Q33E94 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX4Q33E94 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RFX4Q33E94 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.4□□□□□ -1.54
RFX4Q33E94 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX4Q33E94 MIR551B-201ENST00000384984 96 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RFX4Q33E94 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RFX4Q33E94 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RFX4Q33E94 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RFX4Q33E94 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC096921.1-201ENST00000411661 375 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC009784.1-201ENST00000426484 460 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 PSMD10P2-201ENST00000432890 672 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 AL359265.1-201ENST00000440296 795 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 SERPINA7P1-201ENST00000443077 631 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 ZNF619P1-201ENST00000446539 752 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.4□□□□□ -1.54
RFX4Q33E94 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX4Q33E94 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.4□□□□□ -1.54
RFX4Q33E94 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.4□□□□□ -1.54
RFX4Q33E94 AC011891.2-201ENST00000604949 397 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 AC092944.2-201ENST00000605443 889 ntBASIC5.4□□□□□ -1.54
RFX4Q33E94 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFX4Q33E94 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.4□□□□□ -1.55
RFX4Q33E94 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.4□□□□□ -1.55
RFX4Q33E94 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFX4Q33E94 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.4□□□□□ -1.55
RFX4Q33E94 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.4□□□□□ -1.55
RFX4Q33E94 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RFX4Q33E94 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFX4Q33E94 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX4Q33E94 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RFX4Q33E94 PSMA6P1-201ENST00000400275 741 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 SEPT14P12-201ENST00000442280 560 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX4Q33E94 LINC02210-201ENST00000444561 288 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX4Q33E94 ABCC13-202ENST00000463099 3842 ntBASIC5.39□□□□□ -1.55
RFX4Q33E94 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX4Q33E94 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX4Q33E94 AC021146.10-201ENST00000515628 706 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms