Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC112492.2-201ENST00000432774 1030 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC104850.1-201ENST00000435940 476 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 Z99127.3-201ENST00000448158 395 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 CDC42P1-201ENST00000456658 548 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 UOX-201ENST00000471089 899 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 HMGN1P12-201ENST00000499125 195 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC021678.1-201ENST00000505195 936 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 PCNAP1-201ENST00000505363 709 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC008629.3-201ENST00000505786 586 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 IGLVIV-59-201ENST00000520218 250 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 ZNF705CP-201ENST00000530515 889 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 OR11J2P-201ENST00000555298 907 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC087477.6-201ENST00000559595 843 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC090515.3-201ENST00000560431 315 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 NDUFA3P4-201ENST00000560814 250 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 OR1E3-201ENST00000575608 948 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC012146.2-201ENST00000576545 416 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 MIR378C-201ENST00000578683 81 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC005518.2-201ENST00000603254 282 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AL096855.2-201ENST00000605785 369 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC116312.1-201ENST00000606841 314 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AP001052.1-201ENST00000626421 99 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC111152.1-202ENST00000635848 339 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 MIR4302-201ENST00000638058 60 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 FAM157B-203ENST00000639350 358 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 MT-RNR2-201ENST00000387347 1559 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC007823.1-201ENST00000569932 1566 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 AC016251.1-201ENST00000624299 4198 ntBASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.12□□□□□ -1.27
RSPO4Q2I0M5 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 NF1P8-201ENST00000415351 1461 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 AC125238.2-201ENST00000430003 1440 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 AC106872.5-201ENST00000508856 1416 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 RNU1-5P-201ENST00000362684 144 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 SNORA51.1-201ENST00000363243 140 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 RNA5SP382-201ENST00000363355 112 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 RN7SKP55-201ENST00000364888 307 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 RNA5SP176-201ENST00000390956 110 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 RNA5SP431-201ENST00000410312 120 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 MTCO3P12-201ENST00000416718 547 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 NUP35P1-201ENST00000422734 947 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 AC233728.2-201ENST00000425348 757 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 RNF19BPX-201ENST00000426224 625 ntBASIC7.11□□□□□ -1.27
RSPO4Q2I0M5 CNOT7P1-201ENST00000429006 852 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms