Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5□□□□□ -1.61
CX3CL1P78423 ARGFXP2-201ENST00000579304 949 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AP001267.4-201ENST00000602598 545 ntBASIC5□□□□□ -1.61
CX3CL1P78423 KATNBL1P5-201ENST00000605015 517 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5□□□□□ -1.61
CX3CL1P78423 AC006924.1-201ENST00000610750 559 ntBASIC5□□□□□ -1.61
CX3CL1P78423 MIR6823-201ENST00000622118 61 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AL122023.1-201ENST00000622847 530 ntBASIC5□□□□□ -1.61
CX3CL1P78423 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 OR5AC4P-202ENST00000642086 985 ntBASIC5□□□□□ -1.61
CX3CL1P78423 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CL1P78423 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 EEF1A1P14-201ENST00000421195 1376 ntBASIC5□□□□□ -1.61
CX3CL1P78423 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CL1P78423 AL731532.1-201ENST00000623972 4236 ntBASIC5□□□□□ -1.61
CX3CL1P78423 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5□□□□□ -1.61
CX3CL1P78423 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CX3CL1P78423 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC025470.1-201ENST00000510053 2032 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 SHQ1P1-201ENST00000437111 1544 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CX3CL1P78423 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CL1P78423 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC019205.1-201ENST00000421830 730 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 OR5W1P-201ENST00000423705 938 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 RPS6P14-201ENST00000425165 719 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 SDR42E1P3-201ENST00000438345 502 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 ARMC4P1-201ENST00000438905 707 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 SOCS5P1-201ENST00000440415 949 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AL627224.1-201ENST00000448334 444 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CL1P78423 RARRES2P3-201ENST00000457739 473 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 RPSAP39-201ENST00000467439 883 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 RPL12P31-201ENST00000478433 450 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 LARP7P4-201ENST00000481075 878 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 OR9N1P-202ENST00000494289 481 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 PSMA2P2-201ENST00000504319 686 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 KHDC1P1-201ENST00000511053 508 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CL1P78423 BTG1P1-201ENST00000540396 508 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CL1P78423 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CL1P78423 BMS1P7-201ENST00000602440 1052 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AP004372.1-201ENST00000604842 844 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 PPATP2-201ENST00000605635 508 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC242628.1-201ENST00000606810 391 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC005021.1-201ENST00000608730 355 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC015819.1-201ENST00000613588 663 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC006249.1-201ENST00000621223 471 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC025262.3-201ENST00000623666 360 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 AC022726.2-201ENST00000634673 547 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 LINC01613-201ENST00000561476 2780 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
CX3CL1P78423 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 AC005725.1-201ENST00000577346 2607 ntBASIC4.99□□□□□ -1.61
CX3CL1P78423 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms