Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC021678.3-201ENST00000517893 476 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.6□□□□□ -1.19
RIPK4P57078 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.6□□□□□ -1.19
RIPK4P57078 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.6□□□□□ -1.19
RIPK4P57078 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.6□□□□□ -1.19
RIPK4P57078 MIR4260-201ENST00000583107 67 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.6□□□□□ -1.19
RIPK4P57078 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.6□□□□□ -1.19
RIPK4P57078 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.6□□□□□ -1.19
RIPK4P57078 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.6□□□□□ -1.19
RIPK4P57078 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.6□□□□□ -1.19
RIPK4P57078 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.59□□□□□ -1.19
RIPK4P57078 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RIPK4P57078 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RIPK4P57078 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.59□□□□□ -1.19
RIPK4P57078 RNU1-59P-201ENST00000364829 162 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.59□□□□□ -1.19
RIPK4P57078 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.59□□□□□ -1.19
RIPK4P57078 AC019205.1-201ENST00000421830 730 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 AC021876.1-201ENST00000425959 359 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 AC064862.4-201ENST00000442180 334 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 SETP20-201ENST00000457046 852 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.59□□□□□ -1.19
RIPK4P57078 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.59□□□□□ -1.19
RIPK4P57078 IGKV3D-34-201ENST00000522638 302 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.59□□□□□ -1.19
RIPK4P57078 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.59□□□□□ -1.19
RIPK4P57078 U1.25-201ENST00000614085 162 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 U1.34-201ENST00000618578 162 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 U1.31-201ENST00000620022 160 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 MAPK10-350ENST00000641777 965 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 AL592429.1-201ENST00000403909 1473 ntBASIC7.59□□□□□ -1.19
RIPK4P57078 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.59□□□□□ -1.19
RIPK4P57078 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RIPK4P57078 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
RIPK4P57078 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
RIPK4P57078 KARSP1-201ENST00000451871 1752 ntBASIC7.59□□□□□ -1.2
RIPK4P57078 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.58□□□□□ -1.2
RIPK4P57078 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RIPK4P57078 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
RIPK4P57078 AC117409.1-201ENST00000470499 1310 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.58□□□□□ -1.2
RIPK4P57078 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RIPK4P57078 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RIPK4P57078 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 GNG5P2-201ENST00000372054 207 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RIPK4P57078 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.58□□□□□ -1.2
RIPK4P57078 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.58□□□□□ -1.2
RIPK4P57078 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.58□□□□□ -1.2
RIPK4P57078 AL161636.2-201ENST00000445179 927 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 HMGN1P36-201ENST00000446623 298 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 FRG2FP-204ENST00000453982 852 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 AC002075.1-201ENST00000457396 676 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.58□□□□□ -1.2
RIPK4P57078 RPL7P51-201ENST00000490532 749 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 CYCSP22-201ENST00000517555 339 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.58□□□□□ -1.2
RIPK4P57078 AP001496.3-201ENST00000580230 913 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 AC006115.2-201ENST00000596823 202 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.58□□□□□ -1.2
RIPK4P57078 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.58□□□□□ -1.2
RIPK4P57078 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.58□□□□□ -1.2
RIPK4P57078 AC087565.3-203ENST00000641018 837 ntBASIC7.58□□□□□ -1.2
RIPK4P57078 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RIPK4P57078 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RIPK4P57078 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RIPK4P57078 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RIPK4P57078 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.57□□□□□ -1.2
RIPK4P57078 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
RIPK4P57078 MRE11P1-201ENST00000464884 2127 ntBASIC7.57□□□□□ -1.2
RIPK4P57078 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RIPK4P57078 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.57□□□□□ -1.2
RIPK4P57078 AC140134.1-201ENST00000511830 3544 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms