Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDH11P55287 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 AL139805.1-201ENST00000407837 289 ntBASIC5.51□□□□□ -1.53
CDH11P55287 AL035422.1-201ENST00000414193 397 ntBASIC5.51□□□□□ -1.53
CDH11P55287 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH11P55287 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH11P55287 AC112492.2-201ENST00000432774 1030 ntBASIC5.51□□□□□ -1.53
CDH11P55287 AC069154.1-201ENST00000432914 542 ntBASIC5.51□□□□□ -1.53
CDH11P55287 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH11P55287 RPL5P7-201ENST00000444235 813 ntBASIC5.51□□□□□ -1.53
CDH11P55287 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH11P55287 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 OSTCP1-201ENST00000455507 450 ntBASIC5.51□□□□□ -1.53
CDH11P55287 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH11P55287 AC026782.2-201ENST00000510845 636 ntBASIC5.51□□□□□ -1.53
CDH11P55287 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH11P55287 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH11P55287 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.51□□□□□ -1.53
CDH11P55287 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH11P55287 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.51□□□□□ -1.53
CDH11P55287 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 MIR4310-201ENST00000582950 57 ntBASIC5.51□□□□□ -1.53
CDH11P55287 GMCL1P2-201ENST00000605230 823 ntBASIC5.51□□□□□ -1.53
CDH11P55287 RPL12P48-201ENST00000605620 304 ntBASIC5.51□□□□□ -1.53
CDH11P55287 AC018690.1-201ENST00000608144 626 ntBASIC5.51□□□□□ -1.53
CDH11P55287 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.51□□□□□ -1.53
CDH11P55287 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 AC025470.1-201ENST00000510053 2032 ntBASIC5.51□□□□□ -1.53
CDH11P55287 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.51□□□□□ -1.53
CDH11P55287 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.51□□□□□ -1.53
CDH11P55287 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDH11P55287 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH11P55287 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH11P55287 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH11P55287 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 RNU6-891P-201ENST00000384280 111 ntBASIC5.5□□□□□ -1.53
CDH11P55287 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH11P55287 SNORA77.2-201ENST00000408571 112 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH11P55287 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 MRPS21P2-201ENST00000424704 264 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AC115283.1-201ENST00000427353 400 ntBASIC5.5□□□□□ -1.53
CDH11P55287 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 Z85994.2-201ENST00000434327 452 ntBASIC5.5□□□□□ -1.53
CDH11P55287 RPL12P11-201ENST00000439970 501 ntBASIC5.5□□□□□ -1.53
CDH11P55287 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 RPS10P18-201ENST00000442662 495 ntBASIC5.5□□□□□ -1.53
CDH11P55287 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH11P55287 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 RPL23AP60-201ENST00000450011 454 ntBASIC5.5□□□□□ -1.53
CDH11P55287 OR52I1-201ENST00000450052 1050 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AL513343.1-201ENST00000451818 792 ntBASIC5.5□□□□□ -1.53
CDH11P55287 RN7SL326P-201ENST00000477493 296 ntBASIC5.5□□□□□ -1.53
CDH11P55287 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH11P55287 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH11P55287 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 ST13P12-201ENST00000508958 1094 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH11P55287 AL136097.3-201ENST00000611097 505 ntBASIC5.5□□□□□ -1.53
CDH11P55287 RN7SL261P-201ENST00000613441 282 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AL162574.2-201ENST00000614618 657 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AL359742.1-201ENST00000622497 540 ntBASIC5.5□□□□□ -1.53
CDH11P55287 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH11P55287 AC073488.6-201ENST00000632293 754 ntBASIC5.5□□□□□ -1.53
CDH11P55287 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 AL442128.2-201ENST00000620246 1824 ntBASIC5.5□□□□□ -1.53
CDH11P55287 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms