Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
NUP98P52948 AC053481.2-202ENST00000582394 1500 ntBASIC7.02□□□□□ -1.29
NUP98P52948 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.02□□□□□ -1.29
NUP98P52948 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.02□□□□□ -1.29
NUP98P52948 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 PWAR1-201ENST00000624188 2414 ntBASIC7.02□□□□□ -1.29
NUP98P52948 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 SNORD1C-201ENST00000363315 78 ntBASIC7.01□□□□□ -1.29
NUP98P52948 AL645927.1-201ENST00000396783 406 ntBASIC7.01□□□□□ -1.29
NUP98P52948 OR4K12P-201ENST00000406538 961 ntBASIC7.01□□□□□ -1.29
NUP98P52948 RPSAP35-201ENST00000413753 818 ntBASIC7.01□□□□□ -1.29
NUP98P52948 EEF1B2P5-201ENST00000444820 548 ntBASIC7.01□□□□□ -1.29
NUP98P52948 FAR2P1-206ENST00000449736 709 ntBASIC7.01□□□□□ -1.29
NUP98P52948 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 DHFRP1-201ENST00000579682 559 ntBASIC7.01□□□□□ -1.29
NUP98P52948 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 AC069307.1-201ENST00000602820 447 ntBASIC7.01□□□□□ -1.29
NUP98P52948 AF117829.2-201ENST00000619538 361 ntBASIC7.01□□□□□ -1.29
NUP98P52948 AL450226.2-201ENST00000622913 439 ntBASIC7.01□□□□□ -1.29
NUP98P52948 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NUP98P52948 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP98P52948 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP98P52948 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
NUP98P52948 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
NUP98P52948 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 RNU1-106P-201ENST00000384382 164 ntBASIC7.01□□□□□ -1.29
NUP98P52948 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 RPS17P17-201ENST00000419392 409 ntBASIC7.01□□□□□ -1.29
NUP98P52948 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP98P52948 MEMO1P4-201ENST00000453590 386 ntBASIC7.01□□□□□ -1.29
NUP98P52948 OSTCP1-201ENST00000455507 450 ntBASIC7.01□□□□□ -1.29
NUP98P52948 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 RNU6-941P-201ENST00000516346 108 ntBASIC7.01□□□□□ -1.29
NUP98P52948 AC006206.1-201ENST00000544842 3387 ntBASIC7.01□□□□□ -1.29
NUP98P52948 BLZF2P-201ENST00000553776 1130 ntBASIC7.01□□□□□ -1.29
NUP98P52948 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP98P52948 MIR6730-201ENST00000622213 67 ntBASIC7.01□□□□□ -1.29
NUP98P52948 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP98P52948 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP98P52948 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7□□□□□ -1.29
NUP98P52948 HSPD1P8-201ENST00000400121 1658 ntBASIC7□□□□□ -1.29
NUP98P52948 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
NUP98P52948 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7□□□□□ -1.29
NUP98P52948 AC006455.6-201ENST00000426192 893 ntBASIC7□□□□□ -1.29
NUP98P52948 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 RPS23P2-201ENST00000463671 415 ntBASIC7□□□□□ -1.29
NUP98P52948 RPS7P6-201ENST00000485777 579 ntBASIC7□□□□□ -1.29
NUP98P52948 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 AP002884.5-201ENST00000595053 1132 ntBASIC7□□□□□ -1.29
NUP98P52948 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
NUP98P52948 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7□□□□□ -1.29
NUP98P52948 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
NUP98P52948 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7□□□□□ -1.29
NUP98P52948 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7□□□□□ -1.29
NUP98P52948 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP98P52948 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
NUP98P52948 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NUP98P52948 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 AP003175.1-201ENST00000641383 6658 ntBASIC6.99□□□□□ -1.29
NUP98P52948 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 AP000534.2-201ENST00000412729 568 ntBASIC6.99□□□□□ -1.29
NUP98P52948 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.99□□□□□ -1.29
NUP98P52948 AC105399.1-202ENST00000447303 205 ntBASIC6.99□□□□□ -1.29
NUP98P52948 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms