Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HOXA1P49639 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA1P49639 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA1P49639 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXA1P49639 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA1P49639 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA1P49639 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HOXA1P49639 AL022311.1-201ENST00000623726 19416 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 AC012254.3-201ENST00000591183 2117 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 RNU6-40P-201ENST00000384254 107 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 MRPS21P5-201ENST00000417885 231 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC073464.3-201ENST00000422564 712 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 ELOBP4-201ENST00000423418 296 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 MTND1P10-201ENST00000426108 832 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC023141.6-201ENST00000429418 337 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 RPL3P11-201ENST00000434028 1146 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA1P49639 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA1P49639 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA1P49639 RPL7L1P3-201ENST00000455249 689 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA1P49639 MTND6P32-201ENST00000457611 483 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA1P49639 RN7SL591P-201ENST00000496150 292 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC093878.1-201ENST00000515630 432 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA1P49639 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA1P49639 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA1P49639 AL121579.2-201ENST00000555466 590 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC027281.1-201ENST00000574178 758 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC008507.3-201ENST00000585753 472 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA1P49639 AC019257.2-201ENST00000605539 497 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AL450270.1-201ENST00000606160 391 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 SNORD96A-201ENST00000606577 79 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AL391834.1-201ENST00000609609 560 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC007347.2-201ENST00000623044 180 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA1P49639 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 AC095038.1-201ENST00000429248 1591 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 AC022306.1-201ENST00000560489 1562 ntBASIC5.12□□□□□ -1.59
HOXA1P49639 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA1P49639 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA1P49639 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
HOXA1P49639 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
HOXA1P49639 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 U3.10-201ENST00000364459 214 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 AL353625.1-202ENST00000366273 571 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HOXA1P49639 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA1P49639 AL391419.1-201ENST00000398901 1275 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 AMZ2P2-201ENST00000406819 1057 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA1P49639 AHCYP8-201ENST00000425108 209 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 AC009303.1-201ENST00000426307 352 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 AL138479.1-201ENST00000426913 484 ntBASIC5.11□□□□□ -1.59
HOXA1P49639 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms