Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CENPAP49450 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CENPAP49450 AC004656.1-201ENST00000568479 4951 ntBASIC5.7□□□□□ -1.5
CENPAP49450 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CENPAP49450 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.7□□□□□ -1.5
CENPAP49450 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.7□□□□□ -1.5
CENPAP49450 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CENPAP49450 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.7□□□□□ -1.5
CENPAP49450 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CENPAP49450 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.69□□□□□ -1.5
CENPAP49450 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.69□□□□□ -1.5
CENPAP49450 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
CENPAP49450 OR10AB1P-202ENST00000641219 1686 ntBASIC5.69□□□□□ -1.5
CENPAP49450 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.69□□□□□ -1.5
CENPAP49450 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CENPAP49450 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CENPAP49450 OR7A2P-201ENST00000304105 930 ntBASIC5.69□□□□□ -1.5
CENPAP49450 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 RNA5SP308-201ENST00000362532 115 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AC026310.1-201ENST00000396004 378 ntBASIC5.69□□□□□ -1.5
CENPAP49450 RN7SKP129-201ENST00000410288 299 ntBASIC5.69□□□□□ -1.5
CENPAP49450 RN7SKP281-201ENST00000410472 352 ntBASIC5.69□□□□□ -1.5
CENPAP49450 MTND2P15-201ENST00000418575 892 ntBASIC5.69□□□□□ -1.5
CENPAP49450 CDC42P6-201ENST00000421246 576 ntBASIC5.69□□□□□ -1.5
CENPAP49450 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.69□□□□□ -1.5
CENPAP49450 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.69□□□□□ -1.5
CENPAP49450 AL390879.1-201ENST00000439143 386 ntBASIC5.69□□□□□ -1.5
CENPAP49450 GXYLT1P1-201ENST00000446657 490 ntBASIC5.69□□□□□ -1.5
CENPAP49450 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 AC092967.1-201ENST00000449016 481 ntBASIC5.69□□□□□ -1.5
CENPAP49450 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 AC103563.5-201ENST00000455643 364 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.69□□□□□ -1.5
CENPAP49450 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.69□□□□□ -1.5
CENPAP49450 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.69□□□□□ -1.5
CENPAP49450 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 AK4P6-201ENST00000505168 528 ntBASIC5.69□□□□□ -1.5
CENPAP49450 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CENPAP49450 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.69□□□□□ -1.5
CENPAP49450 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 RPL3P13-201ENST00000550415 216 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.69□□□□□ -1.5
CENPAP49450 CHEK2P2-201ENST00000554701 672 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.69□□□□□ -1.5
CENPAP49450 OR4H6P-201ENST00000563771 921 ntBASIC5.69□□□□□ -1.5
CENPAP49450 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.69□□□□□ -1.5
CENPAP49450 BNIP3P27-201ENST00000599991 412 ntBASIC5.69□□□□□ -1.5
CENPAP49450 GAPDHP41-201ENST00000613707 975 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AP006248.3-201ENST00000623580 594 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AC079298.2-201ENST00000623885 459 ntBASIC5.69□□□□□ -1.5
CENPAP49450 AC135068.11-201ENST00000636378 921 ntBASIC5.69□□□□□ -1.5
CENPAP49450 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CENPAP49450 CCNT2P1-201ENST00000423082 1315 ntBASIC5.69□□□□□ -1.5
CENPAP49450 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.69□□□□□ -1.5
CENPAP49450 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CENPAP49450 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CENPAP49450 AL606537.1-201ENST00000607258 2011 ntBASIC5.69□□□□□ -1.5
CENPAP49450 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 AC009501.3-201ENST00000605001 1352 ntBASIC5.68□□□□□ -1.5
CENPAP49450 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 PARP4P2-201ENST00000446672 3326 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 AC110792.3-201ENST00000595906 1614 ntBASIC5.68□□□□□ -1.5
CENPAP49450 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CENPAP49450 RNU6-40P-201ENST00000384254 107 ntBASIC5.68□□□□□ -1.5
CENPAP49450 RBBP4P5-201ENST00000398583 1266 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AL353133.1-201ENST00000407695 401 ntBASIC5.68□□□□□ -1.5
CENPAP49450 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.68□□□□□ -1.5
CENPAP49450 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.68□□□□□ -1.5
CENPAP49450 E2F6P1-201ENST00000428850 745 ntBASIC5.68□□□□□ -1.5
CENPAP49450 MED28P4-201ENST00000433137 572 ntBASIC5.68□□□□□ -1.5
CENPAP49450 MTND2P21-201ENST00000436242 1042 ntBASIC5.68□□□□□ -1.5
CENPAP49450 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.68□□□□□ -1.5
CENPAP49450 E2F6P3-201ENST00000441743 743 ntBASIC5.68□□□□□ -1.5
CENPAP49450 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CENPAP49450 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.68□□□□□ -1.5
CENPAP49450 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.68□□□□□ -1.5
CENPAP49450 AC104629.2-201ENST00000468627 598 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms