Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 IMMTP1-201ENST00000435590 2219 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
BRCC3P46736 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
BRCC3P46736 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 AL360271.1-201ENST00000395679 510 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCC3P46736 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.21□□□□□ -1.42
BRCC3P46736 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.21□□□□□ -1.42
BRCC3P46736 AC073909.1-201ENST00000447112 999 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.21□□□□□ -1.42
BRCC3P46736 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 OR7E157P-201ENST00000494376 911 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.21□□□□□ -1.42
BRCC3P46736 RNU6-615P-201ENST00000516065 106 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.21□□□□□ -1.42
BRCC3P46736 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.21□□□□□ -1.42
BRCC3P46736 AL589674.2-201ENST00000604304 337 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 AL034374.2-201ENST00000605281 548 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.21□□□□□ -1.42
BRCC3P46736 AC130360.2-201ENST00000533477 1556 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCC3P46736 SRRM1P3-201ENST00000426911 2678 ntBASIC6.21□□□□□ -1.42
BRCC3P46736 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.2□□□□□ -1.42
BRCC3P46736 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
BRCC3P46736 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 AC005725.1-201ENST00000577346 2607 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 AL159987.1-201ENST00000347911 293 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCC3P46736 OR2AT2P-201ENST00000413438 905 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 OR6E1P-201ENST00000414424 923 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 BMS1P17-202ENST00000416720 316 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 AL022331.1-201ENST00000429025 477 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 Z84478.1-201ENST00000438230 1219 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 FRG2FP-204ENST00000453982 852 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCC3P46736 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 RN7SL72P-201ENST00000460697 269 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
BRCC3P46736 RPS26P39-201ENST00000469206 341 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCC3P46736 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCC3P46736 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCC3P46736 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.2□□□□□ -1.42
BRCC3P46736 AC021678.3-201ENST00000517893 476 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCC3P46736 AC244502.2-201ENST00000543361 851 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 MIR4489-201ENST00000578869 62 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.2□□□□□ -1.42
BRCC3P46736 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCC3P46736 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 GTF2IP4-201ENST00000453092 2054 ntBASIC6.2□□□□□ -1.42
BRCC3P46736 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BRCC3P46736 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BRCC3P46736 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
BRCC3P46736 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BRCC3P46736 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCC3P46736 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCC3P46736 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 AL022323.4-201ENST00000623980 13120 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BRCC3P46736 AP004607.3-201ENST00000530354 3915 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 RNU6-673P-201ENST00000365084 104 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 AL596448.1-201ENST00000415024 392 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.19□□□□□ -1.42
BRCC3P46736 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.19□□□□□ -1.42
BRCC3P46736 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 MRPS16P1-201ENST00000523462 412 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCC3P46736 MIR4260-201ENST00000583107 67 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms