Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.05□□□□□ -1.44
HTTP42858 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.05□□□□□ -1.44
HTTP42858 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.05□□□□□ -1.44
HTTP42858 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HTTP42858 EI24P4-201ENST00000423683 1078 ntBASIC6.05□□□□□ -1.44
HTTP42858 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.05□□□□□ -1.44
HTTP42858 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 AC232271.1-201ENST00000602455 2715 ntBASIC6.05□□□□□ -1.44
HTTP42858 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 AC005224.3-201ENST00000584683 2140 ntBASIC6.05□□□□□ -1.44
HTTP42858 NLRP3P1-201ENST00000622303 1785 ntBASIC6.05□□□□□ -1.44
HTTP42858 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 MIR640-201ENST00000385086 96 ntBASIC6.05□□□□□ -1.44
HTTP42858 RNA5SP332-201ENST00000391063 115 ntBASIC6.05□□□□□ -1.44
HTTP42858 NUDT19P3-201ENST00000404698 555 ntBASIC6.05□□□□□ -1.44
HTTP42858 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 AL359265.2-201ENST00000434367 631 ntBASIC6.05□□□□□ -1.44
HTTP42858 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.05□□□□□ -1.44
HTTP42858 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 AC060766.1-201ENST00000590824 627 ntBASIC6.05□□□□□ -1.44
HTTP42858 BNIP3P22-201ENST00000593399 556 ntBASIC6.05□□□□□ -1.44
HTTP42858 AL391358.1-201ENST00000605342 190 ntBASIC6.05□□□□□ -1.44
HTTP42858 AL359757.1-201ENST00000623176 255 ntBASIC6.05□□□□□ -1.44
HTTP42858 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 FAM71F2-205ENST00000641605 5749 ntBASIC6.05□□□□□ -1.44
HTTP42858 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.04□□□□□ -1.44
HTTP42858 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 U3.3-201ENST00000362986 216 ntBASIC6.04□□□□□ -1.44
HTTP42858 DBIP1-201ENST00000401435 260 ntBASIC6.04□□□□□ -1.44
HTTP42858 RNA5SP487-201ENST00000410186 122 ntBASIC6.04□□□□□ -1.44
HTTP42858 AL590399.4-201ENST00000436561 601 ntBASIC6.04□□□□□ -1.44
HTTP42858 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.04□□□□□ -1.44
HTTP42858 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.04□□□□□ -1.44
HTTP42858 RN7SKP253-201ENST00000516424 309 ntBASIC6.04□□□□□ -1.44
HTTP42858 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.04□□□□□ -1.44
HTTP42858 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.04□□□□□ -1.44
HTTP42858 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.04□□□□□ -1.44
HTTP42858 AC135068.12-201ENST00000637370 931 ntBASIC6.04□□□□□ -1.44
HTTP42858 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
HTTP42858 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HTTP42858 AC092747.4-201ENST00000620519 1861 ntBASIC6.04□□□□□ -1.44
HTTP42858 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HTTP42858 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.04□□□□□ -1.44
HTTP42858 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.04□□□□□ -1.44
HTTP42858 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.04□□□□□ -1.44
HTTP42858 EDDM3DP-201ENST00000554692 434 ntBASIC6.04□□□□□ -1.44
HTTP42858 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.04□□□□□ -1.44
HTTP42858 AL049779.3-201ENST00000557141 606 ntBASIC6.04□□□□□ -1.44
HTTP42858 MIR132-201ENST00000591554 101 ntBASIC6.04□□□□□ -1.44
HTTP42858 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HTTP42858 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 AC144833.1-201ENST00000567953 4089 ntBASIC6.04□□□□□ -1.44
HTTP42858 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.04□□□□□ -1.44
HTTP42858 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 THAP12P4-201ENST00000528321 2266 ntBASIC6.04□□□□□ -1.44
HTTP42858 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HTTP42858 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HTTP42858 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HTTP42858 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 GJA6P-201ENST00000415117 1042 ntBASIC6.03□□□□□ -1.44
HTTP42858 PARP4P1-201ENST00000435945 2337 ntBASIC6.03□□□□□ -1.44
HTTP42858 OR13C1P-201ENST00000457612 963 ntBASIC6.03□□□□□ -1.44
HTTP42858 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.03□□□□□ -1.44
HTTP42858 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.03□□□□□ -1.44
HTTP42858 AL020997.2-201ENST00000602607 184 ntBASIC6.03□□□□□ -1.44
HTTP42858 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms