Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HOXC12P31275 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 RN7SKP174-201ENST00000363803 330 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AL451061.1-201ENST00000407887 862 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 RNA5SP177-201ENST00000410122 107 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC12P31275 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC013404.1-201ENST00000413068 249 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC12P31275 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXC12P31275 RPL21P43-201ENST00000425440 472 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC12P31275 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 PRELID3BP10-201ENST00000431957 584 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC12P31275 OSTCP2-201ENST00000437956 444 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 MTND4P6-201ENST00000438297 472 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC12P31275 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AL161722.1-201ENST00000446972 1032 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AC093166.3-201ENST00000448785 303 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 PMS2P11-201ENST00000451831 574 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 RN7SL180P-201ENST00000466769 294 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC091959.2-201ENST00000477363 321 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 RPL10P7-201ENST00000495649 625 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC104108.1-201ENST00000509930 412 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AP000662.1-201ENST00000530952 487 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC044913.1-201ENST00000557200 430 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 ACTR3BP3-201ENST00000565577 979 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXC12P31275 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC12P31275 AC006539.2-201ENST00000601729 572 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AP001981.2-201ENST00000603241 418 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 RN7SKP299-201ENST00000606679 301 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 AC007342.8-201ENST00000623278 678 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AL359715.5-201ENST00000623431 443 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 AC099667.1-201ENST00000624222 469 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC12P31275 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC12P31275 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC12P31275 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 TTC39DP-201ENST00000416781 1688 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC12P31275 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC12P31275 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC12P31275 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC12P31275 DDX10P2-201ENST00000417796 2614 ntBASIC6.45□□□□□ -1.38
HOXC12P31275 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HOXC12P31275 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 CASC19-206ENST00000641028 1430 ntBASIC6.44□□□□□ -1.38
HOXC12P31275 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXC12P31275 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HOXC12P31275 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXC12P31275 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 RNU6-452P-201ENST00000384406 107 ntBASIC6.44□□□□□ -1.38
HOXC12P31275 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC12P31275 SNORA11.3-201ENST00000408471 128 ntBASIC6.44□□□□□ -1.38
HOXC12P31275 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC12P31275 RNU6-757P-201ENST00000410334 100 ntBASIC6.44□□□□□ -1.38
HOXC12P31275 MTCO1P21-201ENST00000416634 589 ntBASIC6.44□□□□□ -1.38
HOXC12P31275 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXC12P31275 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC12P31275 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC12P31275 OR5AW1P-201ENST00000426334 1006 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms