Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH3P22223 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH3P22223 MIR130B-202ENST00000385018 82 ntBASIC5.93□□□□□ -1.46
CDH3P22223 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH3P22223 VN1R3-201ENST00000418822 919 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 AL590399.2-201ENST00000427536 309 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH3P22223 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH3P22223 AL390879.1-201ENST00000439143 386 ntBASIC5.93□□□□□ -1.46
CDH3P22223 EIF5AP4-201ENST00000441206 465 ntBASIC5.93□□□□□ -1.46
CDH3P22223 SEPT14P12-201ENST00000442280 560 ntBASIC5.93□□□□□ -1.46
CDH3P22223 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH3P22223 AC112184.1-201ENST00000505179 312 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 RN7SKP238-201ENST00000516483 249 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH3P22223 IGKV3D-25-201ENST00000519599 235 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AC027369.2-201ENST00000528030 440 ntBASIC5.93□□□□□ -1.46
CDH3P22223 RPA2P3-201ENST00000533268 770 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 AC090286.3-201ENST00000573133 187 ntBASIC5.93□□□□□ -1.46
CDH3P22223 AC005726.4-201ENST00000582858 458 ntBASIC5.93□□□□□ -1.46
CDH3P22223 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH3P22223 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH3P22223 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 AL359742.1-201ENST00000622497 540 ntBASIC5.93□□□□□ -1.46
CDH3P22223 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 MIR1910-201ENST00000636955 80 ntBASIC5.93□□□□□ -1.46
CDH3P22223 OR7A1P-202ENST00000641542 1158 ntBASIC5.93□□□□□ -1.46
CDH3P22223 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 AL355488.2-201ENST00000609909 2850 ntBASIC5.93□□□□□ -1.46
CDH3P22223 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 AC020656.2-201ENST00000613291 5309 ntBASIC5.93□□□□□ -1.46
CDH3P22223 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 MTCO1P28-201ENST00000574177 1528 ntBASIC5.93□□□□□ -1.46
CDH3P22223 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH3P22223 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH3P22223 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH3P22223 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CDH3P22223 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 RN7SKP275-201ENST00000364626 301 ntBASIC5.92□□□□□ -1.46
CDH3P22223 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 PRUNEP1-201ENST00000425846 705 ntBASIC5.92□□□□□ -1.46
CDH3P22223 BX119904.3-201ENST00000428194 957 ntBASIC5.92□□□□□ -1.46
CDH3P22223 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CDH3P22223 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH3P22223 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH3P22223 NDUFA5P5-201ENST00000468361 342 ntBASIC5.92□□□□□ -1.46
CDH3P22223 AL355032.1-201ENST00000472981 438 ntBASIC5.92□□□□□ -1.46
CDH3P22223 LSM3P4-201ENST00000502948 309 ntBASIC5.92□□□□□ -1.46
CDH3P22223 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 AP003396.4-201ENST00000527574 265 ntBASIC5.92□□□□□ -1.46
CDH3P22223 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 AC027026.1-201ENST00000532323 742 ntBASIC5.92□□□□□ -1.46
CDH3P22223 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 AC090826.1-203ENST00000569235 490 ntBASIC5.92□□□□□ -1.46
CDH3P22223 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH3P22223 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH3P22223 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH3P22223 AC008555.7-201ENST00000605008 583 ntBASIC5.92□□□□□ -1.46
CDH3P22223 AC022400.9-201ENST00000623633 273 ntBASIC5.92□□□□□ -1.46
CDH3P22223 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH3P22223 AC022726.2-201ENST00000634673 547 ntBASIC5.92□□□□□ -1.46
CDH3P22223 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH3P22223 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms