Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 ZNF812P-201ENST00000457674 1694 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGA1P17096 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HMGA1P17096 RNA5SP234-201ENST00000363916 119 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGA1P17096 AC019185.1-201ENST00000442718 389 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HMGA1P17096 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 AL133445.1-201ENST00000467051 452 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGA1P17096 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGA1P17096 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGA1P17096 MRPS21P7-201ENST00000566937 238 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 RBM22P12-201ENST00000567098 1255 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGA1P17096 AC010245.2-201ENST00000606908 1167 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGA1P17096 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGA1P17096 AC090607.5-201ENST00000615692 224 ntBASIC5.95□□□□□ -1.46
HMGA1P17096 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HMGA1P17096 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGA1P17096 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGA1P17096 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGA1P17096 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HMGA1P17096 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 CASC19-248ENST00000641674 1356 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 AL589993.1-201ENST00000407450 2524 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 LINC01963-201ENST00000562038 3148 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGA1P17096 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HMGA1P17096 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 SNORD1C-201ENST00000363315 78 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGA1P17096 CFL1P1-202ENST00000432948 411 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 AC006335.2-201ENST00000437993 330 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGA1P17096 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 UBA52P7-201ENST00000486088 380 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 RN7SL547P-201ENST00000490793 290 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 DUTP1-201ENST00000493631 470 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGA1P17096 OR7E18P-201ENST00000592589 702 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 AC069234.4-201ENST00000621276 412 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 AC018659.2-201ENST00000624690 715 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC079777.1-201ENST00000623836 1953 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGA1P17096 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC025470.1-201ENST00000510053 2032 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
HMGA1P17096 AC241584.2-201ENST00000637142 2090 ntBASIC5.94□□□□□ -1.46
HMGA1P17096 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HMGA1P17096 RN7SKP278-201ENST00000410504 342 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 RPS6P23-201ENST00000413224 722 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGA1P17096 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms