Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP000926.3-201ENST00000497201 299 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AP001960.1-201ENST00000506494 658 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AC138409.2-202ENST00000507274 458 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFRAP16234 OR5H7P-201ENST00000514084 930 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 TRIM77BP-201ENST00000524985 1119 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 OR4A42P-201ENST00000531397 938 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 RPA2P1-201ENST00000556557 721 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC005244.1-201ENST00000582566 339 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AL355974.3-201ENST00000617383 467 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFRAP16234 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFRAP16234 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFRAP16234 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFRAP16234 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 BRAFP1-201ENST00000445336 2703 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFRAP16234 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PDGFRAP16234 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFRAP16234 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
PDGFRAP16234 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFRAP16234 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFRAP16234 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFRAP16234 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
PDGFRAP16234 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFRAP16234 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 SELENOWP1-201ENST00000322792 252 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PDGFRAP16234 RN7SKP186-201ENST00000365371 303 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFRAP16234 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFRAP16234 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFRAP16234 RPS4XP5-201ENST00000419038 768 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AC245884.2-201ENST00000426257 404 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AL663074.2-201ENST00000440621 479 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 BMS1P10-201ENST00000443754 1120 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 HLA-DPA3-207ENST00000454398 229 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AC094085.1-201ENST00000468914 584 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC091917.2-201ENST00000505002 744 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AC006499.4-201ENST00000510947 694 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFRAP16234 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC007346.2-201ENST00000564816 892 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFRAP16234 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC005224.3-201ENST00000584683 2140 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AC090236.2-201ENST00000587933 1101 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AL713998.2-201ENST00000604538 1198 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFRAP16234 AC108673.3-201ENST00000609183 335 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 AL365181.4-201ENST00000609800 547 ntBASIC6.21□□□□□ -1.42
PDGFRAP16234 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFRAP16234 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
PDGFRAP16234 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDGFRAP16234 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PDGFRAP16234 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC007159.1-201ENST00000566529 4706 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 RNA5SP477-201ENST00000362639 119 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 SUGT1P2-201ENST00000379452 992 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AL121977.1-201ENST00000401636 979 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC117434.1-201ENST00000419971 836 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 KIF4CP-201ENST00000422742 1279 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms