Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 RNA5SP435-201ENST00000364044 108 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 RNA5SP131-201ENST00000365452 119 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
FREM3P0C091 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AL355433.1-201ENST00000422804 300 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AC019185.1-201ENST00000442718 389 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.25□□□□□ -1.57
FREM3P0C091 AC073909.1-201ENST00000447112 999 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 PSMA2P2-201ENST00000504319 686 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 SNORA81.2-201ENST00000516868 170 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.25□□□□□ -1.57
FREM3P0C091 AC005244.1-201ENST00000582566 339 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AC007448.1-201ENST00000582714 234 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.25□□□□□ -1.57
FREM3P0C091 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.25□□□□□ -1.57
FREM3P0C091 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.25□□□□□ -1.57
FREM3P0C091 RN7SL787P-201ENST00000613000 284 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AC022467.1-201ENST00000614738 749 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 AC026124.2-201ENST00000621847 656 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
FREM3P0C091 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
FREM3P0C091 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.25□□□□□ -1.57
FREM3P0C091 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
FREM3P0C091 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FREM3P0C091 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.24□□□□□ -1.57
FREM3P0C091 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 RNA5SP394-201ENST00000364216 119 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 MIR130A-201ENST00000385274 89 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FREM3P0C091 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 SNORA11B-201ENST00000408175 129 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC093155.2-201ENST00000420734 937 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 AL662874.1-201ENST00000426065 230 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 AL365220.1-201ENST00000432923 399 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 BX679664.2-201ENST00000439282 283 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC015983.1-201ENST00000441577 373 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.24□□□□□ -1.57
FREM3P0C091 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.24□□□□□ -1.57
FREM3P0C091 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.24□□□□□ -1.57
FREM3P0C091 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC130304.1-201ENST00000622942 2385 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FREM3P0C091 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 SRRM1P3-201ENST00000426911 2678 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.24□□□□□ -1.57
FREM3P0C091 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 AC114786.1-201ENST00000512892 1415 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
FREM3P0C091 GTF2IP4-201ENST00000453092 2054 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.24□□□□□ -1.57
FREM3P0C091 MIR375-201ENST00000362103 64 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 RNA5SP211-201ENST00000365516 117 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 RNU6-171P-201ENST00000384354 107 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FREM3P0C091 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
FREM3P0C091 RN7SKP59-201ENST00000410520 314 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.24□□□□□ -1.57
FREM3P0C091 FRG2FP-204ENST00000453982 852 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 RPL12P39-201ENST00000455456 496 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.24□□□□□ -1.57
FREM3P0C091 RN7SL273P-201ENST00000481561 299 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 RPL7P51-201ENST00000490532 749 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 TOMM22P4-201ENST00000511318 336 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 SNORA43.3-201ENST00000517240 103 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 WBP1LP3-201ENST00000523033 208 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.24□□□□□ -1.57
FREM3P0C091 RNU4ATAC-201ENST00000580972 127 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.24□□□□□ -1.57
FREM3P0C091 AC109309.2-201ENST00000612597 332 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.24□□□□□ -1.57
FREM3P0C091 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
FREM3P0C091 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FREM3P0C091 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
FREM3P0C091 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.23□□□□□ -1.57
FREM3P0C091 AC104964.3-201ENST00000606115 2860 ntBASIC5.23□□□□□ -1.57
FREM3P0C091 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms