Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP3P08254 MRPS16P1-201ENST00000523462 412 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.52□□□□□ -1.37
MMP3P08254 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.52□□□□□ -1.37
MMP3P08254 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.52□□□□□ -1.37
MMP3P08254 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.52□□□□□ -1.37
MMP3P08254 MIR4260-201ENST00000583107 67 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP3P08254 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP3P08254 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 AC007842.1-201ENST00000597336 2039 ntBASIC6.52□□□□□ -1.37
MMP3P08254 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP3P08254 AL355377.1-201ENST00000621125 1653 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC061975.7-201ENST00000592016 2692 ntBASIC6.52□□□□□ -1.37
MMP3P08254 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP3P08254 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 AC078880.4-201ENST00000617627 1749 ntBASIC6.51□□□□□ -1.37
MMP3P08254 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MMP3P08254 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP3P08254 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 AC019070.1-201ENST00000415008 1024 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AL355433.1-201ENST00000422804 300 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AC007568.1-201ENST00000422912 471 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 BTBD7P2-201ENST00000441962 620 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP3P08254 AL162739.1-201ENST00000450606 307 ntBASIC6.51□□□□□ -1.37
MMP3P08254 PFN1P6-201ENST00000476786 399 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AC108693.1-201ENST00000496068 432 ntBASIC6.51□□□□□ -1.37
MMP3P08254 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP3P08254 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP3P08254 MIR132-201ENST00000591554 101 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AC004890.3-201ENST00000605566 1095 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AL136370.1-201ENST00000608166 691 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AC008115.3-201ENST00000614874 549 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AL035661.1-201ENST00000620459 1144 ntBASIC6.51□□□□□ -1.37
MMP3P08254 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP3P08254 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
MMP3P08254 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
MMP3P08254 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP3P08254 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 YES1P1-201ENST00000418510 1628 ntBASIC6.5□□□□□ -1.37
MMP3P08254 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
MMP3P08254 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 SRRM1P3-201ENST00000426911 2678 ntBASIC6.5□□□□□ -1.37
MMP3P08254 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
MMP3P08254 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 OR9K1P-201ENST00000326513 941 ntBASIC6.5□□□□□ -1.37
MMP3P08254 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 SNORA81-201ENST00000408493 178 ntBASIC6.5□□□□□ -1.37
MMP3P08254 NPM1P4-201ENST00000414095 812 ntBASIC6.5□□□□□ -1.37
MMP3P08254 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 CUBNP2-201ENST00000443534 1139 ntBASIC6.5□□□□□ -1.37
MMP3P08254 CYCSP51-201ENST00000443545 318 ntBASIC6.5□□□□□ -1.37
MMP3P08254 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 RPL38P3-201ENST00000484463 213 ntBASIC6.5□□□□□ -1.37
MMP3P08254 RPL32P33-201ENST00000487023 394 ntBASIC6.5□□□□□ -1.37
MMP3P08254 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms