Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RETP07949 IMMTP1-201ENST00000435590 2219 ntBASIC6.11□□□□□ -1.43
RETP07949 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 AC027088.4-201ENST00000611559 1947 ntBASIC6.11□□□□□ -1.43
RETP07949 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 UGT2B24P-201ENST00000514441 1597 ntBASIC6.11□□□□□ -1.43
RETP07949 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RETP07949 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.11□□□□□ -1.43
RETP07949 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RETP07949 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RETP07949 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 RNU1-59P-201ENST00000364829 162 ntBASIC6.11□□□□□ -1.43
RETP07949 AL096711.1-201ENST00000404780 554 ntBASIC6.11□□□□□ -1.43
RETP07949 DPPA2P3-201ENST00000411853 655 ntBASIC6.11□□□□□ -1.43
RETP07949 OR2AT2P-201ENST00000413438 905 ntBASIC6.11□□□□□ -1.43
RETP07949 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.11□□□□□ -1.43
RETP07949 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.11□□□□□ -1.43
RETP07949 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.11□□□□□ -1.43
RETP07949 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.11□□□□□ -1.43
RETP07949 OR13K1P-201ENST00000444577 975 ntBASIC6.11□□□□□ -1.43
RETP07949 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.11□□□□□ -1.43
RETP07949 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.11□□□□□ -1.43
RETP07949 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.11□□□□□ -1.43
RETP07949 AL133445.1-201ENST00000467051 452 ntBASIC6.11□□□□□ -1.43
RETP07949 SNRPCP3-201ENST00000474888 476 ntBASIC6.11□□□□□ -1.43
RETP07949 DUTP7-201ENST00000507982 486 ntBASIC6.11□□□□□ -1.43
RETP07949 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 BX510359.5-201ENST00000515651 304 ntBASIC6.11□□□□□ -1.43
RETP07949 Y_RNA.710-201ENST00000516975 110 ntBASIC6.11□□□□□ -1.43
RETP07949 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.11□□□□□ -1.43
RETP07949 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.11□□□□□ -1.43
RETP07949 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.11□□□□□ -1.43
RETP07949 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 PCNAP4-201ENST00000532690 730 ntBASIC6.11□□□□□ -1.43
RETP07949 AP001858.2-201ENST00000536213 601 ntBASIC6.11□□□□□ -1.43
RETP07949 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.11□□□□□ -1.43
RETP07949 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 MIR1269B-201ENST00000580405 75 ntBASIC6.11□□□□□ -1.43
RETP07949 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 AC022106.1-201ENST00000612834 766 ntBASIC6.11□□□□□ -1.43
RETP07949 U1.25-201ENST00000614085 162 ntBASIC6.11□□□□□ -1.43
RETP07949 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 U1.34-201ENST00000618578 162 ntBASIC6.11□□□□□ -1.43
RETP07949 U1.31-201ENST00000620022 160 ntBASIC6.11□□□□□ -1.43
RETP07949 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.11□□□□□ -1.43
RETP07949 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.11□□□□□ -1.43
RETP07949 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RETP07949 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.11□□□□□ -1.43
RETP07949 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RETP07949 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.1□□□□□ -1.43
RETP07949 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.1□□□□□ -1.43
RETP07949 AC024651.2-201ENST00000562480 2098 ntBASIC6.1□□□□□ -1.43
RETP07949 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.1□□□□□ -1.43
RETP07949 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 CCNT2P1-201ENST00000423082 1315 ntBASIC6.1□□□□□ -1.43
RETP07949 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RETP07949 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RETP07949 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RETP07949 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RETP07949 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.1□□□□□ -1.43
RETP07949 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.1□□□□□ -1.43
RETP07949 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.1□□□□□ -1.43
RETP07949 AC006455.6-201ENST00000426192 893 ntBASIC6.1□□□□□ -1.43
RETP07949 AL022237.1-201ENST00000446663 358 ntBASIC6.1□□□□□ -1.43
RETP07949 AC073909.1-201ENST00000447112 999 ntBASIC6.1□□□□□ -1.43
RETP07949 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.1□□□□□ -1.43
RETP07949 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.1□□□□□ -1.43
RETP07949 AC074087.1-201ENST00000512059 724 ntBASIC6.1□□□□□ -1.43
RETP07949 IGKV1D-22-201ENST00000518953 324 ntBASIC6.1□□□□□ -1.43
RETP07949 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.1□□□□□ -1.43
RETP07949 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.1□□□□□ -1.43
RETP07949 EIF4A2P5-201ENST00000529914 499 ntBASIC6.1□□□□□ -1.43
RETP07949 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.1□□□□□ -1.43
RETP07949 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.1□□□□□ -1.43
RETP07949 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.1□□□□□ -1.43
RETP07949 AC007494.1-201ENST00000562293 760 ntBASIC6.1□□□□□ -1.43
RETP07949 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RETP07949 AC116651.1-201ENST00000609724 556 ntBASIC6.1□□□□□ -1.43
RETP07949 MIR6748-201ENST00000610433 71 ntBASIC6.1□□□□□ -1.43
RETP07949 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms