Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 GTF2IP4-201ENST00000453092 2054 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC239868.2-201ENST00000564237 4527 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RAB5CP1-201ENST00000395972 580 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RPS3P2-201ENST00000421346 701 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 HMGB3P24-201ENST00000433260 622 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 MEMO1P4-201ENST00000453590 386 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RPS23P2-201ENST00000463671 415 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC094085.1-201ENST00000468914 584 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RN7SL570P-201ENST00000484405 292 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 RPS7P6-201ENST00000485777 579 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC021146.10-201ENST00000515628 706 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC021678.3-201ENST00000517893 476 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 IGKV2-4-201ENST00000523070 340 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC139697.1-201ENST00000548429 745 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 HSPE1P2-201ENST00000554777 306 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 DPPA2P4-201ENST00000563717 878 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 AL158152.1-201ENST00000602652 1435 ntBASIC5.81□□□□□ -1.48
HLA-DQB2P05538 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DQB2P05538 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 SNORA64.1-201ENST00000362600 132 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 SLC20A1P1-201ENST00000413906 956 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC021876.1-201ENST00000425959 359 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC022215.1-201ENST00000481770 362 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 NANOGP3-201ENST00000605855 286 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 RN7SL544P-201ENST00000617232 284 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 RN7SL763P-201ENST00000620922 284 ntBASIC5.8□□□□□ -1.48
HLA-DQB2P05538 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DQB2P05538 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 AC092070.2-203ENST00000598377 3644 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 Z95114.1-201ENST00000624264 14574 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 MIR375-201ENST00000362103 64 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 RNA5SP30-201ENST00000365552 115 ntBASIC5.79□□□□□ -1.48
HLA-DQB2P05538 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DQB2P05538 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms