Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC023490.2-201ENST00000359859 470 ntBASIC6.18□□□□□ -1.42
APOEP02649 RNA5SP273-201ENST00000362484 113 ntBASIC6.18□□□□□ -1.42
APOEP02649 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
APOEP02649 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.18□□□□□ -1.42
APOEP02649 BX284632.2-201ENST00000421091 399 ntBASIC6.18□□□□□ -1.42
APOEP02649 KIF4CP-201ENST00000422742 1279 ntBASIC6.18□□□□□ -1.42
APOEP02649 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.18□□□□□ -1.42
APOEP02649 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.18□□□□□ -1.42
APOEP02649 AL512605.1-202ENST00000441919 381 ntBASIC6.18□□□□□ -1.42
APOEP02649 CUBNP2-201ENST00000443534 1139 ntBASIC6.18□□□□□ -1.42
APOEP02649 AL359955.2-201ENST00000445380 353 ntBASIC6.18□□□□□ -1.42
APOEP02649 SDC4P-201ENST00000453285 601 ntBASIC6.18□□□□□ -1.42
APOEP02649 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.18□□□□□ -1.42
APOEP02649 snoU13.29-201ENST00000459370 104 ntBASIC6.18□□□□□ -1.42
APOEP02649 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.18□□□□□ -1.42
APOEP02649 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.18□□□□□ -1.42
APOEP02649 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.18□□□□□ -1.42
APOEP02649 AC108865.2-201ENST00000606881 432 ntBASIC6.18□□□□□ -1.42
APOEP02649 AL365181.4-201ENST00000609800 547 ntBASIC6.18□□□□□ -1.42
APOEP02649 MIR6861-201ENST00000618657 64 ntBASIC6.18□□□□□ -1.42
APOEP02649 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.18□□□□□ -1.42
APOEP02649 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOEP02649 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 AC125336.1-201ENST00000508893 2827 ntBASIC6.17□□□□□ -1.42
APOEP02649 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 PARP4P2-201ENST00000446672 3326 ntBASIC6.17□□□□□ -1.42
APOEP02649 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 Z95114.1-201ENST00000624264 14574 ntBASIC6.17□□□□□ -1.42
APOEP02649 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
APOEP02649 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.17□□□□□ -1.42
APOEP02649 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 RN7SKP128-201ENST00000364270 303 ntBASIC6.17□□□□□ -1.42
APOEP02649 HMGN1P20-201ENST00000411849 300 ntBASIC6.17□□□□□ -1.42
APOEP02649 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.17□□□□□ -1.42
APOEP02649 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.17□□□□□ -1.42
APOEP02649 USP24P1-201ENST00000433802 779 ntBASIC6.17□□□□□ -1.42
APOEP02649 RPS3AP38-201ENST00000435889 763 ntBASIC6.17□□□□□ -1.42
APOEP02649 VN1R110P-201ENST00000438988 971 ntBASIC6.17□□□□□ -1.42
APOEP02649 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
APOEP02649 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 HLA-DPA3-207ENST00000454398 229 ntBASIC6.17□□□□□ -1.42
APOEP02649 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.17□□□□□ -1.42
APOEP02649 RNA5SP438-201ENST00000516561 112 ntBASIC6.17□□□□□ -1.42
APOEP02649 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.17□□□□□ -1.42
APOEP02649 AC090888.3-201ENST00000558917 509 ntBASIC6.17□□□□□ -1.42
APOEP02649 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.17□□□□□ -1.42
APOEP02649 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.17□□□□□ -1.42
APOEP02649 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 AC016745.2-201ENST00000608834 3443 ntBASIC6.17□□□□□ -1.42
APOEP02649 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
APOEP02649 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.17□□□□□ -1.42
APOEP02649 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.16□□□□□ -1.42
APOEP02649 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.16□□□□□ -1.42
APOEP02649 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.16□□□□□ -1.42
APOEP02649 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.16□□□□□ -1.42
APOEP02649 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.16□□□□□ -1.42
APOEP02649 GAPDHP71-201ENST00000511530 1003 ntBASIC6.16□□□□□ -1.42
APOEP02649 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 PCNAP4-201ENST00000532690 730 ntBASIC6.16□□□□□ -1.42
APOEP02649 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.16□□□□□ -1.42
APOEP02649 AC068305.2-201ENST00000550567 1205 ntBASIC6.16□□□□□ -1.42
APOEP02649 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.16□□□□□ -1.42
APOEP02649 NPM1P42-201ENST00000560329 862 ntBASIC6.16□□□□□ -1.42
APOEP02649 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.16□□□□□ -1.42
APOEP02649 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.16□□□□□ -1.42
APOEP02649 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.16□□□□□ -1.42
APOEP02649 AL139099.4-201ENST00000614802 114 ntBASIC6.16□□□□□ -1.42
APOEP02649 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.16□□□□□ -1.42
APOEP02649 MAPK10-350ENST00000641777 965 ntBASIC6.16□□□□□ -1.42
APOEP02649 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOEP02649 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
APOEP02649 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms