Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 MIR6503-201ENST00000622884 86 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC091059.2-201ENST00000623355 614 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 PCAT14-202ENST00000627127 3935 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC005261.2-201ENST00000593427 4258 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC120036.2-201ENST00000509729 1474 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL353133.1-201ENST00000407695 401 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 CTSL3P-202ENST00000412179 788 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 MTND2P12-201ENST00000417560 1252 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC013410.1-201ENST00000436223 1232 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RPEP4-201ENST00000437636 602 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 PPIAP10-201ENST00000438675 458 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL034369.1-201ENST00000453808 477 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RPL31P11-202ENST00000454082 372 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AKR1D1P1-201ENST00000457236 936 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RNU1-88P-201ENST00000459274 128 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RPS3AP49-201ENST00000472161 790 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RN7SL790P-201ENST00000474043 298 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RN7SL502P-201ENST00000481857 290 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 EIF4EP5-201ENST00000528228 640 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 OR4A42P-201ENST00000531397 938 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AP001858.2-201ENST00000536213 601 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 OR4C49P-201ENST00000563891 900 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RN7SL66P-201ENST00000582099 264 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 SYPL1P2-201ENST00000582878 727 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC008555.7-201ENST00000605008 583 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AL137246.1-201ENST00000607072 977 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 SNORA74.4-201ENST00000607595 199 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 AC026367.3-201ENST00000619032 590 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 RAB28P4-201ENST00000622233 665 ntBASIC4.37□□□□□ -1.71
HLA-DQA1P01909 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DQA1P01909 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RNA5SP308-201ENST00000362532 115 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms