Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC106872.4-201ENST00000510050 523 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC008429.4-201ENST00000521201 182 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 OR6M2P-201ENST00000529831 871 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.33□□□□□ -1.56
LMX1BO60663 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.33□□□□□ -1.56
LMX1BO60663 AL136520.1-202ENST00000555494 763 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 MIR3614-201ENST00000581261 86 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 MIR4760-201ENST00000585040 80 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.33□□□□□ -1.56
LMX1BO60663 AP003117.1-201ENST00000602771 554 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.33□□□□□ -1.56
LMX1BO60663 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.33□□□□□ -1.56
LMX1BO60663 FAM27E2-201ENST00000619668 403 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 AC129778.1-202ENST00000623812 261 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 MTCO1P1-201ENST00000624263 1081 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 AL591379.1-207ENST00000635982 261 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.33□□□□□ -1.56
LMX1BO60663 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
LMX1BO60663 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LMX1BO60663 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
LMX1BO60663 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LMX1BO60663 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 TTC41P-205ENST00000551270 3963 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LMX1BO60663 SNORA51.1-201ENST00000363243 140 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 RNA5SP346-201ENST00000363541 121 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC245884.2-201ENST00000426257 404 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC104843.2-201ENST00000427666 297 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 PPIAP10-201ENST00000438675 458 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 SOCS5P1-201ENST00000440415 949 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC097463.1-201ENST00000447288 481 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.32□□□□□ -1.56
LMX1BO60663 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.32□□□□□ -1.56
LMX1BO60663 RN7SL326P-201ENST00000477493 296 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.32□□□□□ -1.56
LMX1BO60663 SNORA26.10-201ENST00000516427 141 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 TPM3P3-201ENST00000521343 354 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LMX1BO60663 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LMX1BO60663 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.32□□□□□ -1.56
LMX1BO60663 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 AL139022.2-201ENST00000606934 443 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC034229.4-201ENST00000607861 441 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC110792.4-201ENST00000609843 298 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC092266.1-201ENST00000610958 165 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.32□□□□□ -1.56
LMX1BO60663 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 AC092070.2-203ENST00000598377 3644 ntBASIC5.32□□□□□ -1.56
LMX1BO60663 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.32□□□□□ -1.56
LMX1BO60663 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMX1BO60663 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms