Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX3O60493 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX3O60493 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 NMNAT1P5-201ENST00000559657 841 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX3O60493 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX3O60493 GARSP1-201ENST00000570895 719 ntBASIC5.66□□□□□ -1.5
SNX3O60493 DHFRP1-201ENST00000579682 559 ntBASIC5.66□□□□□ -1.5
SNX3O60493 MIR4258-201ENST00000580920 91 ntBASIC5.66□□□□□ -1.5
SNX3O60493 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 AC139792.1-201ENST00000607051 647 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 AF117829.2-201ENST00000619538 361 ntBASIC5.66□□□□□ -1.5
SNX3O60493 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX3O60493 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX3O60493 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX3O60493 THAP12P5-201ENST00000405864 2275 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 FANCD2P2-201ENST00000437591 1400 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AL513548.1-201ENST00000562904 1724 ntBASIC5.65□□□□□ -1.5
SNX3O60493 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.65□□□□□ -1.5
SNX3O60493 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX3O60493 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNX3O60493 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNX3O60493 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX3O60493 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNX3O60493 RNA5SP241-201ENST00000391326 114 ntBASIC5.65□□□□□ -1.5
SNX3O60493 RN7SKP144-201ENST00000411108 279 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.65□□□□□ -1.5
SNX3O60493 OSTCP4-201ENST00000424397 449 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX3O60493 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 AL645939.3-201ENST00000435408 225 ntBASIC5.65□□□□□ -1.5
SNX3O60493 GAPDHP37-201ENST00000442317 968 ntBASIC5.65□□□□□ -1.5
SNX3O60493 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 NPM1P19-201ENST00000450070 712 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX3O60493 AL157777.1-201ENST00000468100 304 ntBASIC5.65□□□□□ -1.5
SNX3O60493 UBFD1P1-201ENST00000473259 814 ntBASIC5.65□□□□□ -1.5
SNX3O60493 RPS10P28-201ENST00000480396 498 ntBASIC5.65□□□□□ -1.5
SNX3O60493 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX3O60493 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX3O60493 AC098976.1-201ENST00000513014 541 ntBASIC5.65□□□□□ -1.5
SNX3O60493 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX3O60493 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.65□□□□□ -1.5
SNX3O60493 AC122688.1-201ENST00000541494 223 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 MTND2P17-201ENST00000550281 688 ntBASIC5.65□□□□□ -1.5
SNX3O60493 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX3O60493 RN7SL290P-201ENST00000578661 300 ntBASIC5.65□□□□□ -1.5
SNX3O60493 LSM1P2-201ENST00000604911 322 ntBASIC5.65□□□□□ -1.5
SNX3O60493 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX3O60493 AC063952.1-203ENST00000634410 658 ntBASIC5.65□□□□□ -1.5
SNX3O60493 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX3O60493 AC027088.4-201ENST00000611559 1947 ntBASIC5.65□□□□□ -1.51
SNX3O60493 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNX3O60493 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.65□□□□□ -1.51
SNX3O60493 AC117409.1-201ENST00000470499 1310 ntBASIC5.65□□□□□ -1.51
SNX3O60493 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX3O60493 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SNX3O60493 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.65□□□□□ -1.51
SNX3O60493 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNX3O60493 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SNX3O60493 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SNX3O60493 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX3O60493 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
SNX3O60493 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX3O60493 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX3O60493 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 CDY11P-201ENST00000447168 1651 ntBASIC5.64□□□□□ -1.51
SNX3O60493 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SNX3O60493 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX3O60493 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX3O60493 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms