Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.07□□□□□ -1.44
SMAD6O43541 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.07□□□□□ -1.44
SMAD6O43541 RN7SKP248-201ENST00000516278 305 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 RNA5SP271-201ENST00000516700 88 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 SNORA81.2-201ENST00000516868 170 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 WBP1LP3-201ENST00000523033 208 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 IGKV2-4-201ENST00000523070 340 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.07□□□□□ -1.44
SMAD6O43541 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.07□□□□□ -1.44
SMAD6O43541 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.07□□□□□ -1.44
SMAD6O43541 AC090651.1-201ENST00000567865 634 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AC126365.2-201ENST00000580630 379 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AL136131.3-201ENST00000607600 188 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AC016911.1-201ENST00000613297 452 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 AP000432.2-201ENST00000624164 2048 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 AC073365.1-203ENST00000641055 1992 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SMAD6O43541 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.07□□□□□ -1.44
SMAD6O43541 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.06□□□□□ -1.44
SMAD6O43541 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC027088.4-201ENST00000611559 1947 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SMAD6O43541 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.06□□□□□ -1.44
SMAD6O43541 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 RPS7P3-201ENST00000443360 580 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC073109.1-201ENST00000445066 978 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 AC104164.1-201ENST00000460282 590 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 AC124945.1-201ENST00000485133 188 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 RPL23AP40-201ENST00000487630 390 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 SUMO2P19-201ENST00000518920 295 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 PCNAP4-201ENST00000532690 730 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.06□□□□□ -1.44
SMAD6O43541 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC006530.1-201ENST00000555980 571 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC092121.1-201ENST00000569452 202 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.06□□□□□ -1.44
SMAD6O43541 AC090330.1-201ENST00000588646 764 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 AC100767.2-201ENST00000604840 693 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 LSM1P2-201ENST00000604911 322 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 AC034229.4-201ENST00000607861 441 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.06□□□□□ -1.44
SMAD6O43541 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMAD6O43541 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SMAD6O43541 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.05□□□□□ -1.44
SMAD6O43541 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SMAD6O43541 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 OR5T3-201ENST00000303059 1023 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SMAD6O43541 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMAD6O43541 RN7SKP128-201ENST00000364270 303 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 RN7SKP186-201ENST00000365371 303 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 RN7SKP166-201ENST00000410812 305 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 HMGA1P8-201ENST00000414130 321 ntBASIC6.05□□□□□ -1.44
SMAD6O43541 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms