Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK2O43353 AC096586.2-201ENST00000610260 441 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 AL122023.1-201ENST00000622847 530 ntBASIC5.9□□□□□ -1.46
RIPK2O43353 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RIPK2O43353 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 PARP4P2-201ENST00000446672 3326 ntBASIC5.9□□□□□ -1.47
RIPK2O43353 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.9□□□□□ -1.47
RIPK2O43353 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.9□□□□□ -1.47
RIPK2O43353 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RIPK2O43353 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK2O43353 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.9□□□□□ -1.47
RIPK2O43353 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 GNL2P1-201ENST00000451274 2190 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RIPK2O43353 AL080312.1-201ENST00000256654 824 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.89□□□□□ -1.47
RIPK2O43353 AL133482.1-201ENST00000415988 498 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC009784.1-201ENST00000426484 460 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AL354893.1-201ENST00000433735 348 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 ARAFP2-201ENST00000440565 559 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC239798.3-201ENST00000454459 408 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC083899.1-201ENST00000454465 3819 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC099670.1-201ENST00000455141 783 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC019084.1-201ENST00000457337 432 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 RN7SL552P-201ENST00000462094 276 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 RPS17P5-201ENST00000498293 408 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC073648.3-201ENST00000504939 925 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC137627.1-201ENST00000545761 289 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC019322.1-201ENST00000571869 389 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 AC027796.1-201ENST00000575593 512 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.89□□□□□ -1.47
RIPK2O43353 AL162574.1-201ENST00000615702 950 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RIPK2O43353 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
RIPK2O43353 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK2O43353 MTCO1P28-201ENST00000574177 1528 ntBASIC5.89□□□□□ -1.47
RIPK2O43353 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RIPK2O43353 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.89□□□□□ -1.47
RIPK2O43353 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.88□□□□□ -1.47
RIPK2O43353 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIPK2O43353 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIPK2O43353 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIPK2O43353 CUL4AP1-201ENST00000514750 1863 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.88□□□□□ -1.47
RIPK2O43353 OR56A4-201ENST00000330728 1209 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIPK2O43353 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.88□□□□□ -1.47
RIPK2O43353 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.88□□□□□ -1.47
RIPK2O43353 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RIPK2O43353 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RIPK2O43353 PRELID1P1-201ENST00000403549 660 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 RN7SKP108-201ENST00000411367 328 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 OR52N3P-201ENST00000413417 934 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 SMC4P1-201ENST00000414479 527 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 AC130360.1-201ENST00000425489 1117 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.88□□□□□ -1.47
RIPK2O43353 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.88□□□□□ -1.47
RIPK2O43353 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.88□□□□□ -1.47
RIPK2O43353 AC023141.8-201ENST00000442554 208 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.88□□□□□ -1.47
RIPK2O43353 SNORD125-201ENST00000459538 96 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 AC023245.1-201ENST00000468501 517 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 DEFB109A-201ENST00000482450 265 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 RPS7P6-201ENST00000485777 579 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 RPL12P30-201ENST00000488389 499 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 KATNBL1P4-201ENST00000503545 918 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 SNX18P25-201ENST00000510539 758 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 SEPT10P1-201ENST00000517342 1162 ntBASIC5.88□□□□□ -1.47
RIPK2O43353 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms