Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ENSAP3-201ENST00000312710 333 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 RNA5SP321-201ENST00000362722 111 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC087752.1-201ENST00000391360 558 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 RSL24D1P4-201ENST00000400938 484 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 RPS27AP11-201ENST00000402798 447 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 Y_RNA.599-201ENST00000410489 109 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 MTND3P1-201ENST00000441336 220 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AL360221.1-201ENST00000445989 335 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 RPL31P15-201ENST00000449770 338 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC080014.1-201ENST00000496877 1201 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 OR5H7P-201ENST00000514084 930 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 RNU6-1004P-201ENST00000516584 111 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC008429.4-201ENST00000521201 182 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 SNRPCP6-201ENST00000528310 210 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 NPIPB14P-203ENST00000532298 987 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC011472.4-201ENST00000615848 491 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 MIR6826-201ENST00000617808 98 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC006213.6-201ENST00000623722 4179 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 RN7SKP23-201ENST00000625159 4301 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 THADA-202ENST00000402360 2974 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 FAM3C2-201ENST00000312214 681 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 RPL11P4-201ENST00000332269 436 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 FABP12P1-201ENST00000401911 322 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 Y_RNA.619-201ENST00000410951 90 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 RAC1P4-201ENST00000419413 579 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 BX510359.3-201ENST00000422168 306 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AL139421.1-201ENST00000423010 169 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 FTH1P5-201ENST00000425761 545 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 YWHAEP5-201ENST00000431545 765 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 RPL23AP19-201ENST00000436229 369 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 UBBP5-201ENST00000446970 266 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 RPL30P6-201ENST00000475925 342 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 GAPDHP36-201ENST00000480688 918 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 RN7SL629P-201ENST00000489622 285 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC092045.1-201ENST00000495716 1231 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC111193.1-201ENST00000504097 155 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC073358.1-201ENST00000505671 684 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC131392.1-201ENST00000506490 633 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC138866.2-201ENST00000508650 584 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 SNX18P23-201ENST00000510867 677 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms