Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC079753.1-201ENST00000623243 3868 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 RN7SKP78-201ENST00000364711 318 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC021876.1-201ENST00000425959 359 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL590399.2-201ENST00000427536 309 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC023141.6-201ENST00000429418 337 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC093166.3-201ENST00000448785 303 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 CFL1P4-201ENST00000451536 498 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 PPIAP27-201ENST00000453800 265 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 RPL31P53-201ENST00000457065 348 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 snoU13.29-201ENST00000459370 104 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC092902.1-201ENST00000486999 259 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 Vault.2-201ENST00000516519 98 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 RPA2P1-201ENST00000556557 721 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC026826.3-201ENST00000561747 158 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC090826.1-203ENST00000569235 490 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 LINC00556-201ENST00000569603 412 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AP001267.4-201ENST00000602598 545 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL138960.1-201ENST00000613838 513 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC244100.4-201ENST00000617747 388 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL445670.1-201ENST00000618889 801 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 OR11H2-202ENST00000641517 1085 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 KYNUP3-201ENST00000574386 1341 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 MFSD8-239ENST00000641590 2479 ntBASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV5S1A1TA0A578 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AF287957.1-201ENST00000607368 1595 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 SNX18P3-202ENST00000565670 1750 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 GCNT6-201ENST00000379591 934 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 MTATP6P31-201ENST00000406985 692 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AL358178.1-201ENST00000407698 397 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 RN7SKP279-201ENST00000411383 298 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AJ239321.1-201ENST00000424255 564 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 MTND4LP14-201ENST00000429447 288 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 VN1R110P-201ENST00000438988 971 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 MTND2P30-201ENST00000456663 382 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 LDHBP2-201ENST00000456969 1005 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 EIF2S2P4-201ENST00000461070 984 ntBASIC6.18□□□□□ -1.42
TCRBV5S1A1TA0A578 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms