Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC090181.3-201ENST00000624777 1514 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 PPBPP2-201ENST00000513150 1362 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 CASC19-238ENST00000641523 1558 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RN7SKP185-201ENST00000362813 326 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RNA5SP326-201ENST00000363209 110 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 MIR1275-201ENST00000408770 80 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC096921.1-201ENST00000411661 375 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 OR10T1P-201ENST00000424327 947 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 TIMM8BP2-201ENST00000445940 251 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 EEF1B2P3-201ENST00000447718 678 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC009963.4-201ENST00000448535 339 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 PPIAP27-201ENST00000453800 265 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RPS23P2-201ENST00000463671 415 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC104339.1-201ENST00000465478 348 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RN7SL193P-201ENST00000491708 276 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 SCARNA18.1-201ENST00000516330 83 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC139365.2-201ENST00000517972 253 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC104966.1-201ENST00000467010 1464 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AC068870.1-201ENST00000563737 2455 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 AL360270.2-201ENST00000562952 5985 ntBASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAV27A0A087WT01 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 SAMM50P1-201ENST00000455403 1399 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 COX6B1P3-201ENST00000312310 260 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 RPL7P58-201ENST00000402913 758 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 MRPL53P1-201ENST00000414323 319 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL158827.1-201ENST00000416300 391 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 NIFKP3-201ENST00000417799 865 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 BX284632.2-201ENST00000421091 399 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC126120.1-201ENST00000431082 470 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL512605.1-202ENST00000441919 381 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL359955.2-201ENST00000445380 353 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC068228.1-201ENST00000461723 211 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 OR51A1P-201ENST00000511110 946 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 PCNAP4-201ENST00000532690 730 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC007956.1-201ENST00000555623 542 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC096996.1-201ENST00000563813 325 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms