Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 OR2W4P-201ENST00000406496 926 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 BMS1P17-202ENST00000416720 316 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL022331.1-201ENST00000429025 477 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL731534.1-201ENST00000434711 269 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC073909.1-201ENST00000447112 999 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 OR7L1P-201ENST00000456181 380 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 PFN1P6-201ENST00000476786 399 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 RPL38P3-201ENST00000484463 213 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 RN7SL466P-201ENST00000497546 295 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC008945.1-201ENST00000505144 499 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC074087.1-201ENST00000512059 724 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 SNORA43.3-201ENST00000517240 103 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 HMGB1P42-201ENST00000532126 553 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 DPPA2P4-201ENST00000563717 878 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC090651.1-201ENST00000567865 634 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 MIR3176-201ENST00000582210 90 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 FO393422.1-201ENST00000603908 708 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL683813.2-201ENST00000605245 502 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL445670.1-201ENST00000618889 801 ntBASIC6.15□□□□□ -1.42
YIPF1Q9Y548 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
YIPF1Q9Y548 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 AC006511.3-201ENST00000624929 1783 ntBASIC6.15□□□□□ -1.43
YIPF1Q9Y548 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
YIPF1Q9Y548 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 BRD7P6-201ENST00000431406 1860 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AP003170.5-201ENST00000397185 335 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AL391361.1-201ENST00000405580 489 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 OR3A2-201ENST00000408891 1076 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AL357752.1-201ENST00000412817 349 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AL596448.1-201ENST00000415024 392 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AC016027.5-201ENST00000427227 210 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 GAPDHP48-201ENST00000436626 961 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 Z84478.1-201ENST00000438230 1219 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AC023141.8-201ENST00000442554 208 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 RPS4XP14-201ENST00000493072 781 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 RNU6-615P-201ENST00000516065 106 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 IGBP1P1-201ENST00000554337 1009 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 MIR4301-201ENST00000577203 66 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 MIR4489-201ENST00000578869 62 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 MIR4260-201ENST00000583107 67 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AL691477.1-201ENST00000624398 162 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 AC027279.4-201ENST00000624371 2072 ntBASIC6.14□□□□□ -1.43
YIPF1Q9Y548 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
YIPF1Q9Y548 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms