Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 NPM1P38-201ENST00000403835 865 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 RN7SKP121-201ENST00000410842 305 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC245884.2-201ENST00000426257 404 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 NDUFA5P1-201ENST00000433858 341 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL353718.1-201ENST00000451028 517 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 SEPT7P6-201ENST00000469999 1143 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 RPL34P33-201ENST00000486062 334 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 RN7SKP157-201ENST00000516174 282 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC130364.2-201ENST00000528639 604 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 RPA2P1-201ENST00000556557 721 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AL359704.2-201ENST00000604335 521 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC009032.1-201ENST00000617574 431 ntBASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSX2IPQ9Y2D8 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AL354854.1-201ENST00000455940 1363 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 OR2M1P-201ENST00000318104 951 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 SNORA21-201ENST00000362423 132 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AL607077.1-201ENST00000401718 499 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 RPS3P2-201ENST00000421346 701 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 PPIAP10-201ENST00000438675 458 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AL353662.1-201ENST00000439099 327 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 VN1R38P-201ENST00000450265 887 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AL356390.1-201ENST00000455684 397 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 MTND6P32-201ENST00000457611 483 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 CR383656.1-201ENST00000484916 377 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 RNA5SP271-201ENST00000516700 88 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC090236.2-201ENST00000587933 1101 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC090330.1-201ENST00000588646 764 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AL953862.2-201ENST00000603089 820 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC242628.1-201ENST00000606810 391 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC129915.3-201ENST00000634128 948 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 GTF2IP4-201ENST00000453092 2054 ntBASIC6.69□□□□□ -1.34
SSX2IPQ9Y2D8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SSX2IPQ9Y2D8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms