Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LDHAP2-201ENST00000437325 985 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 RPS26P41-201ENST00000450370 284 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 HIGD1AP8-201ENST00000453927 274 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AC147055.3-201ENST00000510547 851 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MRPS21P7-201ENST00000566937 238 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AC006115.2-201ENST00000596823 202 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 MIR6837-201ENST00000620884 64 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 AC009831.5-201ENST00000624000 3189 ntBASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
SHANK2Q9UPX8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 U8.4-201ENST00000363626 134 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AL645733.1-201ENST00000402250 217 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 PSMD10P3-201ENST00000437000 448 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 CYCSP12-201ENST00000437729 300 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 LDHBP2-201ENST00000456969 1005 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC139697.1-201ENST00000548429 745 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AL163952.1-202ENST00000569625 600 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AL450226.2-201ENST00000622913 439 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC007938.2-201ENST00000604666 2634 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
SHANK2Q9UPX8 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 RPS6P23-201ENST00000413224 722 ntBASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 AC092106.1-201ENST00000444291 373 ntBASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 AC079841.1-201ENST00000481228 950 ntBASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 RPL15P21-201ENST00000495592 567 ntBASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 RPEP1-201ENST00000504507 658 ntBASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
SHANK2Q9UPX8 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
SHANK2Q9UPX8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 METTL15P3-201ENST00000415522 1221 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 AC009220.1-201ENST00000451614 275 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 DNAJB5P1-201ENST00000454004 806 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 AP000547.1-201ENST00000454360 617 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 AC093267.1-201ENST00000489176 961 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 MIR4697-201ENST00000582977 78 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 WBP11P1-201ENST00000562560 1931 ntBASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.52□□□□□ -1.05
SHANK2Q9UPX8 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AL008638.3-201ENST00000623027 5182 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AC018765.1-201ENST00000623357 3446 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 RN7SKP28-201ENST00000364770 305 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 RMRPP5-201ENST00000411156 267 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 AURKAPS1-201ENST00000451805 1212 ntBASIC8.51□□□□□ -1.05
SHANK2Q9UPX8 RPL17P2-201ENST00000491913 451 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms