Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AP003471.1-202ENST00000319051 1988 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 HSP90AA2P-201ENST00000530115 2196 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 DYNC1I2P1-201ENST00000435916 1838 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 CAP1P2-201ENST00000417455 1409 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 HDAC1P1-201ENST00000455482 1445 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 USP3-201ENST00000268049 5311 ntTSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC131971.1-201ENST00000332881 1482 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6-1009P-201ENST00000390996 107 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 RSL24D1P4-201ENST00000400938 484 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AL139098.1-201ENST00000407291 389 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 OR7E7P-201ENST00000455678 1012 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 OR13C1P-201ENST00000457612 963 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC026336.1-201ENST00000466577 351 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC025881.1-201ENST00000518851 512 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 IGKV2-29-201ENST00000521304 372 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AP003080.1-202ENST00000526526 915 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 OR9G2P-201ENST00000533326 880 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 MELK-208ENST00000536987 2125 ntTSL 2 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 SMARCE1P3-201ENST00000553649 1231 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC037479.1-201ENST00000558361 625 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 MIR5682-201ENST00000584864 76 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AL035411.2-201ENST00000604022 421 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AL139041.1-201ENST00000605480 610 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC122710.3-201ENST00000606566 541 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 MIR6780B-201ENST00000610307 79 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 DLEU2_1.1-201ENST00000612089 120 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 DLEU2_1.2-201ENST00000614667 120 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 Six3os1_2.1-201ENST00000616963 217 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 uc_338.21-201ENST00000622458 147 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AC011379.1-201ENST00000508713 3025 ntBASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
PDZRN3Q9UPQ7 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 MARK2P4-201ENST00000503381 2380 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC007012.2-201ENST00000623206 1676 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC138915.4-201ENST00000565549 4147 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 SPATA31C2-201ENST00000324915 3777 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6-1227P-201ENST00000383981 107 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC234771.4-201ENST00000441416 730 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC079781.1-201ENST00000441505 394 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 VN1R10P-201ENST00000447106 875 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 CFTRP1-201ENST00000456646 183 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SL775P-201ENST00000498361 336 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 MORF4L2P1-201ENST00000503761 858 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC114324.2-202ENST00000503812 134 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 FAM92A1P2-202ENST00000504766 877 ntBASIC9.23□□□□□ -0.93
PDZRN3Q9UPQ7 AC011352.3-201ENST00000505162 593 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms