Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC245407.2-201ENST00000614199 451 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC007546.1-201ENST00000619452 559 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AL356095.2-201ENST00000624025 457 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC026887.1-201ENST00000624657 2985 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 MIR3191-201ENST00000636300 76 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC119674.1-212ENST00000641155 993 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 JAKMIP2-AS1-201ENST00000626945 1920 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
LHX6Q9UPM6 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
LHX6Q9UPM6 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
LHX6Q9UPM6 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.08
LHX6Q9UPM6 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 EIF4BP6-201ENST00000431936 1828 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RPGRIP1L-210ENST00000568653 2429 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 GNL3LP1-201ENST00000399458 1643 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 PART1-202ENST00000506884 2068 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.288-201ENST00000364854 92 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RNVU1-7-201ENST00000383858 164 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MIR30C1-201ENST00000385227 89 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MIR1296-201ENST00000408136 92 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 SNORA11C-201ENST00000408532 129 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC080125.1-201ENST00000414888 684 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AL807761.1-201ENST00000417622 171 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RPSAP62-201ENST00000432596 833 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MTND5P15-201ENST00000434246 349 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC002504.1-201ENST00000438281 691 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RPS15AP9-201ENST00000439856 381 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RPSAP76-201ENST00000444599 853 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RNU6-864P-201ENST00000516256 108 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 ACTBP6-201ENST00000520036 1090 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AP001994.1-201ENST00000527539 826 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 OR7E1P-201ENST00000533891 958 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RAN-211ENST00000541679 572 ntTSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MIR3167-201ENST00000579623 85 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MIR4450-201ENST00000583589 65 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AL683813.2-201ENST00000605245 502 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 STRADA-224ENST00000617949 705 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC132825.6-201ENST00000638861 357 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 AC020604.1-201ENST00000622979 1909 ntBASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
LHX6Q9UPM6 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms