Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AC138866.2-201ENST00000508650 584 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AC021422.1-201ENST00000621212 473 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 RNF19BPY-201ENST00000458209 1550 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 IMMTP1-201ENST00000435590 2219 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 RPL34P27-201ENST00000428810 349 ntBASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 HMGN1P36-201ENST00000446623 298 ntBASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 CYCSP22-201ENST00000517555 339 ntBASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 IGBP1P1-201ENST00000554337 1009 ntBASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.76□□□□□ -1.17
NPC1L1Q9UHC9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 LCOR-201ENST00000286067 4542 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 RNA5SP242-201ENST00000364171 118 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 SDHDP6-201ENST00000414693 480 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 HMGB3P24-201ENST00000433260 622 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 CLUHP1-201ENST00000435012 1190 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 LRRC37A14P-201ENST00000452297 462 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 RPS23P2-201ENST00000463671 415 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 RPS7P6-201ENST00000485777 579 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 DUTP1-201ENST00000493631 470 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 RPS17P5-201ENST00000498293 408 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 NRBF2P4-201ENST00000520874 850 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 DPPA3P2-202ENST00000557188 1219 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 MIR4311-201ENST00000580794 100 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AP001267.4-201ENST00000602598 545 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AC022467.1-201ENST00000614738 749 ntBASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
NPC1L1Q9UHC9 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 RPL11P3-201ENST00000395256 523 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AL391422.1-201ENST00000402155 436 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 Z93019.1-201ENST00000416450 973 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 RNF10P1-201ENST00000418589 369 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 BX510359.3-201ENST00000422168 306 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AC009237.12-201ENST00000604755 742 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 AC130360.2-201ENST00000533477 1556 ntBASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.74□□□□□ -1.17
NPC1L1Q9UHC9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms