Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 CASC19-228ENST00000641414 1684 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 AL034546.1-201ENST00000623740 3693 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 RLIMP2-201ENST00000427891 1563 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRFN1Q9P244 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.97□□□□□ -1.45
LRFN1Q9P244 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LRFN1Q9P244 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LRFN1Q9P244 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LRFN1Q9P244 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LRFN1Q9P244 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
LRFN1Q9P244 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
LRFN1Q9P244 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LRFN1Q9P244 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LRFN1Q9P244 API5P1-201ENST00000424316 1510 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC007485.2-201ENST00000623493 1667 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 FUNDC2P3-201ENST00000334716 533 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 HMGB1P10-201ENST00000395823 563 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AL355143.1-201ENST00000407101 841 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 RNU2-17P-201ENST00000410290 190 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 MTND4LP17-201ENST00000414607 293 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 HSPE1P16-201ENST00000426640 348 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC091390.2-201ENST00000432573 374 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 MRPS21P3-201ENST00000436696 262 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 RPSAP40-201ENST00000442343 891 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 MTCYBP21-201ENST00000443300 1113 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 OR2L9P-201ENST00000444456 913 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 PSMC1P13-201ENST00000458195 985 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 RPL32P14-201ENST00000463196 378 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 RPL12P24-201ENST00000474907 486 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 SETP6-201ENST00000479329 568 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC121161.1-201ENST00000510606 652 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC018797.1-201ENST00000510791 255 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 LINC00556-201ENST00000569603 412 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 DYNLL1P1-201ENST00000595442 269 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 SUMO2P14-201ENST00000604488 293 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AL391834.1-201ENST00000609609 560 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC110792.4-201ENST00000609843 298 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 uc_338.31-201ENST00000615595 186 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC016957.2-201ENST00000616998 848 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 MIR6811-201ENST00000620409 58 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AP001264.1-201ENST00000620602 703 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 NCOA4P2-201ENST00000340589 1813 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 RPL31P11-201ENST00000426558 1558 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AL136531.3-201ENST00000624378 3658 ntBASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LRFN1Q9P244 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LRFN1Q9P244 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
LRFN1Q9P244 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRFN1Q9P244 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms