Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 WBP1LP3-201ENST00000523033 208 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 TRIM77BP-201ENST00000524985 1119 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AP003080.1-202ENST00000526526 915 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 PCNAP4-201ENST00000532690 730 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 MIR4310-201ENST00000582950 57 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 NANOGP3-201ENST00000605855 286 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 AC018628.1-201ENST00000624147 3819 ntBASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCSER1Q9C0I3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC117409.1-201ENST00000470499 1310 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 MFSD8-219ENST00000641228 2559 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 U3.10-201ENST00000364459 214 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 RNA5SP500-201ENST00000364486 119 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 RNA5SP91-201ENST00000390902 119 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 RN7SKP29-201ENST00000410957 272 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 METTL15P3-201ENST00000415522 1221 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 EIF5AP4-201ENST00000441206 465 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 NDUFA5P5-201ENST00000468361 342 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC099521.1-201ENST00000482557 334 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC105384.2-201ENST00000508433 640 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC027369.2-201ENST00000528030 440 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC105036.1-201ENST00000566222 271 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AP001357.1-201ENST00000586304 1053 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AL365181.4-201ENST00000609800 547 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC090220.1-201ENST00000593078 1699 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AL359955.1-201ENST00000455242 3275 ntBASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCSER1Q9C0I3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 RNU1-150P-201ENST00000362491 162 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 RNA5SP477-201ENST00000362639 119 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC019205.1-201ENST00000421830 730 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 VN1R21P-201ENST00000426703 765 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 GAPDHP48-201ENST00000436626 961 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 NDUFS5P5-201ENST00000437256 321 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC093166.4-201ENST00000457867 318 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 RN7SL57P-201ENST00000493687 290 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 RNA5SP438-201ENST00000516561 112 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AP000648.1-201ENST00000529682 397 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 NANOGNBP2-201ENST00000544753 553 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC007066.2-202ENST00000566531 914 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AL031601.1-201ENST00000605702 394 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AL359742.1-201ENST00000622497 540 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC022400.9-201ENST00000623633 273 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AC129778.1-202ENST00000623812 261 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AL591379.1-207ENST00000635982 261 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 AL078595.2-201ENST00000605309 1780 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 PDZK1P1-202ENST00000425209 1350 ntBASIC6.53□□□□□ -1.36
CCSER1Q9C0I3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms