Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 DHFRP1-201ENST00000579682 559 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC024267.2-201ENST00000582737 417 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC073342.3-201ENST00000624211 193 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL162377.2-201ENST00000624532 337 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC008993.2-201ENST00000631744 806 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL137141.1-201ENST00000624622 4836 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC106754.1-201ENST00000562632 1513 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL731532.1-201ENST00000623972 4236 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AL353743.3-201ENST00000442109 1468 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 FUNDC2P3-201ENST00000334716 533 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 MTCO2P17-201ENST00000424336 677 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC245884.2-201ENST00000426257 404 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC083862.1-201ENST00000427378 1242 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 Z80107.1-201ENST00000436830 412 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 RPL6P30-201ENST00000443382 862 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 PPIAP32-201ENST00000449940 472 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 CASP1P2-201ENST00000526830 1258 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 TPRX1P1-201ENST00000557620 319 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC084759.1-201ENST00000561168 290 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AF230666.2-201ENST00000602328 725 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AP001033.2-201ENST00000609701 1003 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 MIR6774-201ENST00000614651 70 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AL359976.1-201ENST00000418655 3528 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 MTCO1P28-201ENST00000574177 1528 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 AC005261.2-201ENST00000593427 4258 ntBASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM54Q9BYV2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM54Q9BYV2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms