Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC008124.1-201ENST00000609803 9730 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC016712.1-201ENST00000431088 378 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 NDUFA5P9-201ENST00000472609 340 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC105233.1-201ENST00000498840 781 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC074255.1-201ENST00000511259 501 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC092724.1-201ENST00000624623 3397 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC114876.1-201ENST00000490962 1366 ntBASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 U3.36-201ENST00000408418 213 ntBASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC209154.1-201ENST00000582156 337 ntBASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC137695.1-201ENST00000604126 489 ntBASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AL450226.2-201ENST00000622913 439 ntBASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 AC022034.1-201ENST00000512867 2156 ntBASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHANK3Q9BYB0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 RN7SKP27-201ENST00000410684 333 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 COX6CP17-201ENST00000421389 185 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AC007161.1-204ENST00000423039 460 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AC011753.3-201ENST00000443436 406 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AC067852.5-201ENST00000589299 310 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AC083809.1-201ENST00000615051 472 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 AP002991.2-201ENST00000623807 2801 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 PABPC1P8-201ENST00000452851 2086 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 PANDAR-201ENST00000629595 1506 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.3□□□□□ -1.24
SHANK3Q9BYB0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms