Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC068790.2-201ENST00000602601 557 ntBASIC7.09□□□□□ -1.27
PTPN18Q99952 OR4H6P-202ENST00000603819 340 ntBASIC7.09□□□□□ -1.27
PTPN18Q99952 Z99289.3-201ENST00000605586 594 ntBASIC7.09□□□□□ -1.27
PTPN18Q99952 AC009159.2-201ENST00000617603 606 ntBASIC7.09□□□□□ -1.27
PTPN18Q99952 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.09□□□□□ -1.27
PTPN18Q99952 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
PTPN18Q99952 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PTPN18Q99952 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 AL023806.3-201ENST00000638502 2704 ntBASIC7.09□□□□□ -1.27
PTPN18Q99952 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
PTPN18Q99952 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PTPN18Q99952 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.09□□□□□ -1.28
PTPN18Q99952 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
PTPN18Q99952 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.09□□□□□ -1.28
PTPN18Q99952 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
PTPN18Q99952 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
PTPN18Q99952 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
PTPN18Q99952 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.09□□□□□ -1.28
PTPN18Q99952 CASC19-255ENST00000641733 1385 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 GUCY1B2-204ENST00000531898 1979 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
PTPN18Q99952 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 MTND4LP21-201ENST00000415303 295 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 MTND1P33-201ENST00000446251 917 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 MORF4L1P4-201ENST00000450245 976 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 SIAH1P1-201ENST00000479411 923 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC108693.1-201ENST00000496068 432 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC010627.1-201ENST00000503819 1294 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 RN7SKP265-201ENST00000516448 223 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 EEF1A1P37-201ENST00000522748 715 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC7.08□□□□□ -1.28
PTPN18Q99952 MRPS36P5-201ENST00000551909 298 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.08□□□□□ -1.28
PTPN18Q99952 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC084759.1-201ENST00000561168 290 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC106785.3-201ENST00000564064 847 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC005776.1-201ENST00000603164 290 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC106052.1-201ENST00000608029 497 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC096861.1-201ENST00000616652 240 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 TMEM30CP-203ENST00000637814 1035 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
PTPN18Q99952 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.08□□□□□ -1.28
PTPN18Q99952 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
PTPN18Q99952 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.08□□□□□ -1.28
PTPN18Q99952 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PTPN18Q99952 AL132656.3-201ENST00000606384 1595 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 AC138915.4-201ENST00000565549 4147 ntBASIC7.08□□□□□ -1.28
PTPN18Q99952 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PTPN18Q99952 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
PTPN18Q99952 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PTPN18Q99952 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
PTPN18Q99952 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms