Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 AC092647.3-201ENST00000443044 633 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 HMGB1P40-201ENST00000525121 540 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 AC011447.4-201ENST00000587562 111 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 AC095055.1-201ENST00000603472 1113 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 CYP4F35P-202ENST00000636121 390 ntBASIC9.38□□□□□ -0.91
IFT140Q96RY7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
IFT140Q96RY7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
IFT140Q96RY7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 RNU1-32P-201ENST00000363937 159 ntBASIC9.37□□□□□ -0.91
IFT140Q96RY7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.37□□□□□ -0.91
IFT140Q96RY7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 STRADBP1-201ENST00000478954 1281 ntBASIC9.37□□□□□ -0.91
IFT140Q96RY7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 AC008897.1-201ENST00000494006 347 ntBASIC9.37□□□□□ -0.91
IFT140Q96RY7 RN7SKP99-201ENST00000517028 307 ntBASIC9.37□□□□□ -0.91
IFT140Q96RY7 RN7SKP147-201ENST00000517154 244 ntBASIC9.37□□□□□ -0.91
IFT140Q96RY7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
IFT140Q96RY7 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.37□□□□□ -0.91
IFT140Q96RY7 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 C4BPAP2-201ENST00000428434 478 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 TRY2P-201ENST00000448860 689 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 AC092905.1-201ENST00000467527 949 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 CYP4F27P-201ENST00000514557 494 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 C1GALT1P3-201ENST00000522049 819 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 AL133406.3-201ENST00000606817 541 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 AL023583.1-201ENST00000607518 1143 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 TCL6_3.1-201ENST00000619064 137 ntBASIC9.36□□□□□ -0.91
IFT140Q96RY7 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
IFT140Q96RY7 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.36□□□□□ -0.91
IFT140Q96RY7 OR55B1P-203ENST00000641518 2602 ntBASIC9.35□□□□□ -0.91
IFT140Q96RY7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
IFT140Q96RY7 RPS3AP38-201ENST00000435889 763 ntBASIC9.35□□□□□ -0.91
IFT140Q96RY7 RPL31P44-201ENST00000447680 377 ntBASIC9.35□□□□□ -0.91
IFT140Q96RY7 RN7SL385P-201ENST00000468873 276 ntBASIC9.35□□□□□ -0.91
IFT140Q96RY7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 AC068790.4-201ENST00000602474 263 ntBASIC9.35□□□□□ -0.91
IFT140Q96RY7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
IFT140Q96RY7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
IFT140Q96RY7 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
IFT140Q96RY7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
IFT140Q96RY7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms