Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC006213.6-201ENST00000623722 4179 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 RNA5SP152-201ENST00000365184 110 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL359694.1-201ENST00000403247 604 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL033519.1-201ENST00000407266 307 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 HMGA1P8-201ENST00000414130 321 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 GTF2IP5-201ENST00000414608 731 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 BMS1P13-201ENST00000417301 885 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 Z82198.3-201ENST00000421145 199 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 RPL23AP85-201ENST00000421838 433 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 PTPN2P1-201ENST00000423212 1072 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 MTATP6P26-201ENST00000445926 662 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 VN1R38P-201ENST00000450265 887 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 RN7SKP198-201ENST00000459286 306 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC005165.2-201ENST00000466070 380 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 RPL5P33-201ENST00000487833 905 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 SCARNA5-201ENST00000516201 276 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AGGF1P5-201ENST00000567900 919 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC138207.8-204ENST00000579588 527 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC097065.2-201ENST00000608159 533 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC004801.6-201ENST00000616571 978 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC061999.1-201ENST00000624454 177 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC136428.4-201ENST00000634254 1155 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC105749.1-201ENST00000631338 2008 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL355488.2-201ENST00000609909 2850 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX18Q96RF0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC095038.1-201ENST00000429248 1591 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX18Q96RF0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX18Q96RF0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL157831.2-201ENST00000564681 3095 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX18Q96RF0 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL354868.1-201ENST00000417077 482 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AHCYP8-201ENST00000425108 209 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL512661.1-201ENST00000434586 1253 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC064862.5-201ENST00000440618 334 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX18Q96RF0 AL034369.1-201ENST00000453808 477 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 CCNJP2-201ENST00000457810 1163 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC104164.3-201ENST00000467363 1258 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC117394.1-201ENST00000477323 567 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC104982.1-201ENST00000478775 574 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 STRADBP1-201ENST00000478954 1281 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 RN7SL741P-201ENST00000482473 289 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC091965.3-201ENST00000506236 208 ntBASIC5.85□□□□□ -1.47
SNX18Q96RF0 AC131392.1-201ENST00000506490 633 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms