Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AL159987.1-201ENST00000347911 293 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 MIR130A-201ENST00000385274 89 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 RPS3AP2-201ENST00000407190 754 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AKR1B10P1-201ENST00000425765 942 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC127526.2-201ENST00000426436 775 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 PCNPP2-201ENST00000441651 455 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 MEMO1P4-201ENST00000453590 386 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC084754.1-201ENST00000463466 464 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 RPS23P2-201ENST00000463671 415 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 RPSAP37-201ENST00000470913 821 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 UBFD1P1-201ENST00000473259 814 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC093719.1-201ENST00000480427 441 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC022215.1-201ENST00000481770 362 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 RN7SL570P-201ENST00000484405 292 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 DUTP1-201ENST00000493631 470 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 ST13P12-201ENST00000508958 1094 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC074255.1-201ENST00000511259 501 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC079600.1-201ENST00000550326 297 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC027243.2-201ENST00000602530 724 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC100767.2-201ENST00000604840 693 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC106872.5-201ENST00000508856 1416 ntBASIC4.79□□□□□ -1.64
GAFA1Q96PS6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GAFA1Q96PS6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 MIR375-201ENST00000362103 64 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 RN7SKP279-201ENST00000411383 298 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AL022331.1-201ENST00000429025 477 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 HMGB3P24-201ENST00000433260 622 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 RPS23P6-201ENST00000466136 431 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 PDCL3P4-201ENST00000489621 720 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC073610.1-201ENST00000489971 396 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC021678.3-201ENST00000517893 476 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AP004609.2-201ENST00000532177 190 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC060780.2-201ENST00000589047 198 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 HIRAP1-201ENST00000605318 787 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 NANOGP3-201ENST00000605855 286 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 RN7SL544P-201ENST00000617232 284 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 RN7SL763P-201ENST00000620922 284 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 AL034546.1-201ENST00000623740 3693 ntBASIC4.78□□□□□ -1.64
GAFA1Q96PS6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GAFA1Q96PS6 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.77□□□□□ -1.65
GAFA1Q96PS6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms