Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 OR7A2P-201ENST00000304105 930 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 OR10R3P-201ENST00000361688 942 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RNA5SP308-201ENST00000362532 115 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RNA5SP346-201ENST00000363541 121 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 MIR301B-201ENST00000390813 78 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AL353133.1-201ENST00000407695 401 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC245096.1-201ENST00000413104 546 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC096632.2-201ENST00000438139 1239 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RSU1P1-201ENST00000453416 441 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 ACA64.4-201ENST00000459070 127 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC091544.1-201ENST00000484702 348 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 OR11I1P-201ENST00000486033 954 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RN7SL350P-201ENST00000492591 299 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC105391.1-201ENST00000503155 1045 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC008868.1-201ENST00000509786 737 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RNU6-1334P-201ENST00000516032 105 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 OR56A7P-201ENST00000524865 941 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 CHEK2P2-201ENST00000554701 672 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RN7SL475P-201ENST00000583379 298 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 MIR8082-201ENST00000612488 81 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 AC063923.1-201ENST00000478982 1619 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC007342.5-201ENST00000571340 2142 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 RNA5SP375-201ENST00000362975 119 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 SNORA70.6-201ENST00000383934 134 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 RPS7P14-201ENST00000426405 583 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 RN7SL836P-201ENST00000476140 296 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AP000859.1-201ENST00000525536 307 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 OR10D4P-201ENST00000525892 951 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AL390334.1-201ENST00000556395 450 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC037479.1-201ENST00000558361 625 ntBASIC4.37□□□□□ -1.71
AP1S3Q96PC3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.37□□□□□ -1.71
AP1S3Q96PC3 OR4C49P-201ENST00000563891 900 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms