Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC009413.1-201ENST00000414823 399 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC098592.1-201ENST00000419352 333 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC008850.1-201ENST00000427546 362 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 ANKRD54P1-201ENST00000433115 471 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 RPEP4-201ENST00000437636 602 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC073614.1-201ENST00000438690 650 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AL161626.1-201ENST00000441480 490 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 PSMA6P2-201ENST00000457574 686 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC015820.1-201ENST00000473882 321 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC092989.1-201ENST00000481235 277 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 TPT1P3-201ENST00000492841 512 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC005178.1-201ENST00000508392 440 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 SNX18P25-201ENST00000510539 758 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 RNU6-264P-201ENST00000517134 104 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC016629.2-201ENST00000597341 199 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC015849.6-201ENST00000605454 474 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AL121873.1-201ENST00000616013 524 ntBASIC8.54□□□□□ -1.04
TRIM47Q96LD4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM47Q96LD4 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 RNU6-1042P-201ENST00000384204 107 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 RPL21P32-201ENST00000419877 477 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AL672212.1-201ENST00000422246 400 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AJ239321.1-201ENST00000424255 564 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 TRGV7-201ENST00000427089 353 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MTND1P32-201ENST00000433043 938 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 BTF3P10-201ENST00000433415 495 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 YWHAZP2-201ENST00000440317 728 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC093799.1-201ENST00000452411 499 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 BX322784.1-201ENST00000455793 1077 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC079193.1-201ENST00000460497 588 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 RN7SL502P-201ENST00000481857 290 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 RN7SL868P-201ENST00000485915 303 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC079203.1-201ENST00000487972 404 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 NACAP6-201ENST00000509572 622 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC023310.2-201ENST00000553844 547 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC010653.1-201ENST00000571108 881 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 EIF4A3P1-201ENST00000578499 647 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC124283.4-201ENST00000581815 456 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AL512605.2-201ENST00000592972 256 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC092032.1-201ENST00000603090 165 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC005518.2-201ENST00000603254 282 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AL096855.2-201ENST00000605785 369 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AL442067.2-201ENST00000614033 363 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC211486.4-201ENST00000621495 113 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC008443.7-201ENST00000622195 246 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms